Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02028 ATGACGCGACCTTACGGTGTGAAGGGACGGAAGAGAAAGCACGCCGAAGACGAAGACCAACAAACGCAACCAAAGAAAGCTGTGGTGGAGCAGAACGAAGAAGAAGAAGAAGAAACACCAAAACCAACACCAGCACCAGTCCCAACCGAGGACGATGAATTGAGCGGTATCCCAATTGCGCCGAGTGAGAACAACACTAACAAACCCAACGTCATCTTCATTCTCGAAAAAGCTTCCTTGGAAGTCGCCAAAGTCGGCAAGACATATCAGCTCTTGAACTCCGATGACCATGCCAATTTCCTCCGAAAAAATAACAAGAATCCCGGAGATTACAGGCCCGACATCACTCATCAGTCCCTTCTATCTATTTTGGATAGCCCACTAAATAAAGCTGGGAGATTGCGATCAGTATACATAAGGACTGAAAAAGGAGTTCTTATAGAGGTTAAGCCCTTTGTTCGTATTCCAAGAACATTCAAACGCTTTGCTGGTGTCATGTTGGAACTGCTTCAAAAATTGAGTATATCTGCTGTTGGCAAGCGCGAGAAACTTCTCCGCACAATCAAAAACCCTGTCACACAGTATTTGCCTATCAACTCACGAAAAATAGGTCTATCATATAGTTCAGAAAAGCTTGTAGATATGGATGACTACGTATCAACTGTTCCCTGCAATATGGACCTTGTCTTTGTGGTAGGAGCAATGGCTCATGGGAAGATTGAGACAGATTATACACAAGATTATATAGCAAGTACGTTTATCCATACATACTCAGTGATTAGACTTTGTACTTGTGTTTTGGAACCTGATACTTTTTTATTTTTAATTTTGTTATCATTAGAGGTTTTTGTTTGA 855 0.4187 MTRPYGVKGRKRKHAEDEDQQTQPKKAVVEQNEEEEEETPKPTPAPVPTEDDELSGIPIAPSENNTNKPNVIFILEKASLEVAKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITHQSLLSILDSPLNKAGRLRSVYIRTEKGVLIEVKPFVRIPRTFKRFAGVMLELLQKLSISAVGKREKLLRTIKNPVTQYLPINSRKIGLSYSSEKLVDMDDYVSTVPCNMDLVFVVGAMAHGKIETDYTQDYIASTFIHTYSVIRLCTCVLEPDTFLFLILLSLEVFV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02028 284 PANTHER NEP1/MRA1 30 258 IPR005304 GO:0070037|GO:0070475
Pumo11g02028 284 FunFam Ribosomal RNA small subunit methyltransferase 71 267 - -
Pumo11g02028 284 MobiDBLite consensus disorder prediction 1 63 - -
Pumo11g02028 284 MobiDBLite consensus disorder prediction 10 32 - -
Pumo11g02028 284 CDD Nep1-like 71 258 IPR005304 GO:0070037|GO:0070475
Pumo11g02028 284 SUPERFAMILY alpha/beta knot 59 249 IPR029028 -
Pumo11g02028 284 Gene3D - 71 268 IPR029026 -
Pumo11g02028 284 Pfam EMG1/NEP1 methyltransferase 73 250 IPR005304 GO:0070037|GO:0070475
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02028 Pumo-Chr11 52363505 52368241 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02028 K14568 - gmx:100788480 430.254