Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02027 ATGGTCCAACCGGCGCCGGTGATGACTCAGTTTCTCAACTCCGTCCTCTCCCAGCGCGGCCCCTCCGCGGTCCCTTACTCCGAGGACACCAAGTGGCTGATCCGCCAGCACCTCGTCGCTCTCACCACCGCGTTCCCTTCTCTGGAGCCCAAAACGGCGTCGTTCACCCACAACGACGGCCGTTCCGTGAACCTCCTCCAGGCCGACGGCACCATCCCGATGACCTTCCAAGGCGTCACCTACAACATCCCCGTCGTCGTCTGGCTCATGGAGTCCTACCCCCGCCACCCGCCCTGCGTCTACGTGAATCCCACGCGCGACATGATCATCAAGCGCCCCCACCCTCACGTTAACCCTTCTGGTTTGGTCTCCGTCCCTTACTTGCAGAATTGGACTTACCCTAGTTCCAACCTCGTCGATCTCGTTCTCAATCTCAGCCTCCACTTCGGTCGTGACCCTCCTCTCTATTCCCAACGCAGACCTAACCCTAACCCTAATACCAATCCCAATCCTCCTCCCAATTTCGGACACTCTCCCTCTAATTTATCTTCTTCTTCTTCATCTGGATATCCCCATGCCCACCCCCCTCCTAGGTCTTACCCTCCTTCCCCTTACCCTGCTCCTCCTTCTAGGGCTCAGTCCACCGAGGATCCTTCTGAGGTTTTCAAGCGGAACGCGATCAACAAGCTTGTGGAGATGGTTCATGGTGATGTTGCCGCGTTGAGGAAGACCAGAGAAGGTGAAATGGAGGGGCTGTTTAGTTTGCAGGGCGTGCTGAAACAGCGTGAGGAGAGTCTCAACAAGGGTTTGAAGGAGATGCAGGAGGAGATGGAGGCTTTGGAGCAGCAGTTACAGATGGTGTTGATGAACACTGATGTTTTGGAAGGGTGGTTGAGGGATAATCAGGGGAAGAAGATGGTGGGTTTGGAGAATCCTGAGGATGCGTTTGAGTGTGTGGATGTGCTCTCCAAGCAGATGCTTGATTGTACTGCTGCTGATTTGGCGATTGAGGACACGCTTTATGCCTTGGATAAGGCGCTTCAGGTGGGGGCTGTGCCGTTTGATCAGTACTTGAGGAGTGTGAGGGCGCTGTCCAGGGAGCAGTTCTTTCACCGCGCCACTGCCGCGAAAGTTAGGGCGGCTCAGTTGCAGGCTCAGGTTGCCAATATGGCTGCTCGGAGTCAGCATTATGGTAGCTGA 1200 0.5575 MVQPAPVMTQFLNSVLSQRGPSAVPYSEDTKWLIRQHLVALTTAFPSLEPKTASFTHNDGRSVNLLQADGTIPMTFQGVTYNIPVVVWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLQNWTYPSSNLVDLVLNLSLHFGRDPPLYSQRRPNPNPNTNPNPPPNFGHSPSNLSSSSSSGYPHAHPPPRSYPPSPYPAPPSRAQSTEDPSEVFKRNAINKLVEMVHGDVAALRKTREGEMEGLFSLQGVLKQREESLNKGLKEMQEEMEALEQQLQMVLMNTDVLEGWLRDNQGKKMVGLENPEDAFECVDVLSKQMLDCTAADLAIEDTLYALDKALQVGAVPFDQYLRSVRALSREQFFHRATAAKVRAAQLQAQVANMAARSQHYGS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02027 399 Gene3D Ubiquitin Conjugating Enzyme 4 156 IPR016135 -
Pumo11g02027 399 MobiDBLite consensus disorder prediction 194 211 - -
Pumo11g02027 399 Gene3D - 321 381 - -
Pumo11g02027 399 ProSiteProfiles Steadiness box (SB) domain profile. 320 388 IPR017916 -
Pumo11g02027 399 SUPERFAMILY UBC-like 17 155 IPR016135 -
Pumo11g02027 399 ProSiteProfiles UEV domain profile. 15 159 IPR008883 GO:0015031|GO:0036211
Pumo11g02027 399 Coils Coil 263 290 - -
Pumo11g02027 399 Pfam Vps23 core domain 315 377 IPR017916 -
Pumo11g02027 399 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 7 387 - -
Pumo11g02027 399 MobiDBLite consensus disorder prediction 154 219 - -
Pumo11g02027 399 MobiDBLite consensus disorder prediction 158 176 - -
Pumo11g02027 399 Pfam UEV domain 35 155 IPR008883 GO:0015031|GO:0036211
Pumo11g02027 399 SUPERFAMILY Endosomal sorting complex assembly domain 320 380 IPR037202 -
Pumo11g02027 399 MobiDBLite consensus disorder prediction 177 192 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02027 K12183 - gmx:100778834 680.633