Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02020 ATGGCTTTGTGTTCAGTTTTTTTCAATCTTATTCTTCTGCTTCTTATCTGTTTCACCAAAGCAGCTTTAGGTGTGTCAAAGCCTTCAGTAACTGATTACCTTAGCCGGGAGATACTGGCACAGCAAGAAGCAGACAGAGTGTATGGATTACCCGGCCAACCTCCGGTGAAGTTCAAACAATATGCTGGTTATATCACTGTCAATGAAACTCATGGTAGAGCACTGTTCTATTGGTTCTTTGAGGCCACTCACAAACCAGAAGAAAAGCCTGTTCTCTTATGGCTCAATGGAGGTCCTGGTTGTTCTTCAATTGGTTATGGAGAAGCAGAAGAGCTAGGACCCTTCTTTCCCCAGGACAGCAGCCAACCAAAGCTAAAGTTGAATCCTTATTCTTGGAATAACGCTGCGAATCTTTTGTTTTTGGAATCCCCTGTTGGAGTGGGATTCTCCTACACCAACACCAGCAGAGATATAAGTGAGCTTGGTGACACCATTACTGCTAAAGATTCGCACACCTTTATCATCAAGTGGTTTAGGAGATTTCCACAATTCAGATCACACAAGTTCTACATTGCCGGTGAAAGCTATGCAGGGCACTATGTTCCGCAACTTTCTGAGCTCATTTTCGATAATAATCGCAATCCTGCTGAGAAAGACTACATTAACTTCAAAGGATTCCTGATTGGAAATGCATTATTGGACGACGAAACAGATCAAAAGGGTATGATAGATTATGCGTGGGATCATGCTGTGATATCTGATGGAGTATACCATAATATTACAAGCATATGCAATTTCAGCCTTCCAATTCAAAATCAAACAACTGAGTGCAATGTGGAACTCAATAAGTACTTCGCTGTGTATAAGATTATTGACATGTATAGCTTGTACACTCCCAGGTGTTTCAGCAACAACAGCAGCACCAAAAAGACTGCCCCTCAAACTTTTTCCAAAATTGATGGGTGGCATAGAAAACCAGCTGGATATGATCCTTGTGCATCAGATTATACTGAAGTGTACCTAAACAGACCAGAAGTCCAAAAGGCATTGCATGCCAATGTCACCAAAATTCCCTATCCATGGACTCACTGCAGCGATAATATCACATTTTGGAATGACTCACCACAGTCCATGCTTCCTGTCATCAAGAAGCTTATTGCTGGTGGTATTCGCATTTGGGTTTACAGTGGAGATACCGATGGAAGAATTCCCGTGACTGCAACAAGATACACTCTTAGAAAGTTGGGGCTTGGGATTGTTGAAGATTGGACTCCCTGGTATACCAGCAAGCAGGTGGGAGGATGGACCATTGCTTACGATGGGCTTACTTTTGTTACCATAAGAGGTGCTGGTCATCAAGTTCCTACTTTCACTCCCAAGAAAGCTCTGCAGTTGGTTCGACACTTCCTAGCAAATAAGAAATTACCATCTCAACCAATTTAA 1443 0.4234 MALCSVFFNLILLLLICFTKAALGVSKPSVTDYLSREILAQQEADRVYGLPGQPPVKFKQYAGYITVNETHGRALFYWFFEATHKPEEKPVLLWLNGGPGCSSIGYGEAEELGPFFPQDSSQPKLKLNPYSWNNAANLLFLESPVGVGFSYTNTSRDISELGDTITAKDSHTFIIKWFRRFPQFRSHKFYIAGESYAGHYVPQLSELIFDNNRNPAEKDYINFKGFLIGNALLDDETDQKGMIDYAWDHAVISDGVYHNITSICNFSLPIQNQTTECNVELNKYFAVYKIIDMYSLYTPRCFSNNSSTKKTAPQTFSKIDGWHRKPAGYDPCASDYTEVYLNRPEVQKALHANVTKIPYPWTHCSDNITFWNDSPQSMLPVIKKLIAGGIRIWVYSGDTDGRIPVTATRYTLRKLGLGIVEDWTPWYTSKQVGGWTIAYDGLTFVTIRGAGHQVPTFTPKKALQLVRHFLANKKLPSQPI 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02020 480 ProSitePatterns Serine carboxypeptidases, histidine active site. 442 459 IPR033124 GO:0004185
Pumo11g02020 480 SUPERFAMILY alpha/beta-Hydrolases 42 475 IPR029058 -
Pumo11g02020 480 FunFam Carboxypeptidase 41 303 - -
Pumo11g02020 480 Gene3D - 378 471 - -
Pumo11g02020 480 FunFam Carboxypeptidase 328 475 - -
Pumo11g02020 480 FunFam Carboxypeptidase 378 472 - -
Pumo11g02020 480 ProSitePatterns Serine carboxypeptidases, serine active site. 191 198 IPR018202 GO:0004185
Pumo11g02020 480 Pfam Serine carboxypeptidase 51 472 IPR001563 GO:0004185|GO:0006508
Pumo11g02020 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 459 IPR001563 GO:0004185|GO:0006508
Pumo11g02020 480 Gene3D alpha/beta hydrolase 41 303 IPR029058 -
Pumo11g02020 480 Gene3D - 332 369 - -
Pumo11g02020 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Pumo11g02020 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Pumo11g02020 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Pumo11g02020 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 202 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g02020 Pumo-Chr11 52259564 52268918 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g02020 340 475 Calmodulin-binding Proteins AT2G22960 29.927 2.74e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02020 K16297 - gmx:100797264 943.34