Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo11g02011 | ATGGCTCCCGGGCGTCGACGCGGAGCGAACAAGGCGAAGGCCAATGGCCACTTGAGTTTGGGCGATCTTGTGCTCGCTAAGGTCAAGGGCTTCCCCGCTTGGCCTGCTAAGATAAGCAGGCCTGAAGATTGGGAGAAAGTCCCTGATCCGAAGAAATATTTTGTTCAATTCTTTGGTACAAAAGAAATAGCTTTTGTTGCCCCAGCAGATATTCAGGTATTTACCAGTGAGGCTAAAAATAAGTTGTCTGCTCGTCTTCAAGGCAAGACAAAGTACTTTGCCCAAGCTGTGAAGGAAATATGTGCAGCATTTGATGAGATGCAGAAACAGAAGGCTAGTGGTTTGGCAGATTCCACTGATGATTCTCATATTGGTTCAGAGGCTCCTTCTAATGATGGGGTAGTAGGTAACCTAAAGGATGCTACTGATGCTGTGGTATCAAATGCAGAAAAAGATAACAGTGATATGGATAATGTTGGCTCTAATTTGGAGCACTGTACAGAGAGAATAGGAGAAAATGACAGCCAAGATGAAAAGCTCTCTGTATCTAACCATCCAAATGAAAGTTCTTCTGTTTCATCACCCGTGATAAAAAATAAATTAGCCATTGGTTCAGAGCCAAAGAAGAATGCTAACAAATCTAGTCTTAAAGGTACTAGTAATGTTAATGATTTTGGGCAAGATGATAATGGACATAGTGATTTATCAAATGGGTCCACGCCAAGAAAGCTTGATAATGGCTCAAGGAAGAAAAGTGAAGCTGCAGGTGATAGTAATAGAAATGGTGGATCATCTACTGGAAAATTTTTGAAGGAGGGAAATTGTACTGGCCAGTGGTGA | 840 | 0.4214 | MAPGRRRGANKAKANGHLSLGDLVLAKVKGFPAWPAKISRPEDWEKVPDPKKYFVQFFGTKEIAFVAPADIQVFTSEAKNKLSARLQGKTKYFAQAVKEICAAFDEMQKQKASGLADSTDDSHIGSEAPSNDGVVGNLKDATDAVVSNAEKDNSDMDNVGSNLEHCTERIGENDSQDEKLSVSNHPNESSSVSSPVIKNKLAIGSEPKKNANKSSLKGTSNVNDFGQDDNGHSDLSNGSTPRKLDNGSRKKSEAAGDSNRNGGSSTGKFLKEGNCTGQW | 279 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo11g02011 | 279 | SMART | PWWP_4 | 18 | 75 | IPR000313 | - | |
| Pumo11g02011 | 279 | MobiDBLite | consensus disorder prediction | 171 | 279 | - | - | |
| Pumo11g02011 | 279 | SUPERFAMILY | Tudor/PWWP/MBT | 15 | 111 | - | - | |
| Pumo11g02011 | 279 | MobiDBLite | consensus disorder prediction | 182 | 198 | - | - | |
| Pumo11g02011 | 279 | MobiDBLite | consensus disorder prediction | 208 | 243 | - | - | |
| Pumo11g02011 | 279 | MobiDBLite | consensus disorder prediction | 113 | 137 | - | - | |
| Pumo11g02011 | 279 | MobiDBLite | consensus disorder prediction | 257 | 279 | - | - | |
| Pumo11g02011 | 279 | Gene3D | - | 10 | 115 | - | - | |
| Pumo11g02011 | 279 | ProSiteProfiles | PWWP domain profile. | 20 | 77 | IPR000313 | - | |
| Pumo11g02011 | 279 | PANTHER | HEPATOMA-DERIVED GROWTH FACTOR-RELATED | 1 | 259 | - | - | |
| Pumo11g02011 | 279 | Pfam | PWWP domain | 21 | 104 | IPR000313 | - | |
| Pumo11g02011 | 279 | CDD | PWWP_HULK | 21 | 110 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo11g02011 | Pumo-Chr11 | 52177187 | 52180711 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo11g02011 | - | - | gmx:100800279 | 490.345 |