Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g02006 ATGGCGACTCTGCAATTCACCTTCAGCGACTCAACCACCTTGTTCAGGCCTTCTCTACCTTCCACGCGAACCTTCTCTCGTAATCGAAGCCTCATTGTCAAAGCATCCTCTTCTTCTTCATCTGACGACTTCTCCAGAAGCAGGAGACGCTTCATCGCCGAAACCGCCGCACTCTCGGTCTCGGTCCCTCAGCTTGCGGCGCGTGCCGAAGACGCGCTTTCGGAGTGGGAGAGAGTGTACCTCCCTATCGACCCCGGCGTCGTGCTTCTCGACATCGCTTTTGTCCCCGACGACCCCAACCACGGTTTTCTGCTCGGGACGAGGCAAACCATTCTGGAGACAAAAGATGGAGGAAACACTTGGGCTCCGCGTTCGATTCCCTCTGCTGAAGACGAAGATTTCAACTATCGCTTCAATTCTATCAGCTTCAAAGGGAAGGAAGGGTGGATTGTTGGAAAACCTGCGATTCTGTTGTACACTGCTGATGCTGGAGAAAGTTGGGAGAGGATACCGCTCAGTGCTGAACTTCCAGGGGATATGGTGTACATAAAGGCGACAGGCGAGAAGAGTGCAGAGATGGTGACTGACCAAGGTGCAATATATGTTACTGCAAACAGAGGTTACAACTGGAGGGCTGCTGTGCAAGAAACTGTGTCAGCTACTCTTAACAGAACAGTTTCTAGTGGCATTAGTGGTGCAAGTTATTACACTGGGACTTTCAATACTGTCAATCGCTCTCCAGATGGAAGGTATGTCGCTGTCTCAAGTCGGGGCAACTTCTACTTAACCTGGGAGCCTGGTCAGCCATTCTGGCAGCCACATAATAGAGCAGTTGCCAGAAGAATCCAGAACATGGGATGGAGAGCTGATGGTGGTCTGTGGCTTCTTGTTCGTGGAGGTGGTCTTTATCTCAGCAAGGGCACAGGGTTAACTGAAGAATTTGAGGAGGTTCCTGTTCAAAGCAGGGGTTTTGGCATTCTTGATGTTGGATATCGTTCAACGGAGGAGGCTTGGGCAGCAGGAGGAAGTGGTATTCTCTTGAGAACTACTAATGGTGGCAAGTCTTGGATCCGTGACAAAGCTGCCGACAACATTGCTGCAAATTTATACTCAGTGAAGTTCATTGATGAGAAGAAGGGATTTGTATTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATAG 1185 0.5013 MATLQFTFSDSTTLFRPSLPSTRTFSRNRSLIVKASSSSSSDDFSRSRRRFIAETAALSVSVPQLAARAEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTADAGESWERIPLSAELPGDMVYIKATGEKSAEMVTDQGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSTEEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g02006 394 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 15 394 - -
Pumo11g02006 394 Pfam Photosynthesis system II assembly factor YCF48 72 392 IPR028203 -
Pumo11g02006 394 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 75 393 - -
Pumo11g02006 394 PIRSF Photosystem_II_Ycf48-like 38 394 IPR016705 -
Pumo11g02006 394 Gene3D - 135 364 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g02006 - - gmx:100810566 766.533