Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01967 ATGATTCTCCAACACGCTTCTCCTATCTCTCACTTCCACTTCTCTCCACTCTCCCCCTGCAGCAGTAACACCCAACTCAAATCCTTCCTCGCATTCCCCTTCTCTAAAAGAAGGAGAAAGCGCTTATTCGCCAATTCCGGCTCCCGCAAATTCCGCAGAAAATGCACCGTCCGCTTCTGCGCCGTTCCCTCCGACGCCACTCCCAACCGAAATTGGAACGCCGAATTCGCCCGCAGCTTCGTCCTCAAACGAATTTCCAACGAACTCGAATCCGACAACAACAACGATAACGATACCGAATTACAAGCACCGCCATCACCTCCACCGGTTCAATTAGGTTCCAACTTCACCGGCTTCCGCGAGGATCCTATTGTGGATAAGCTGAGGACGCAGCTAGGGGTGATACACCCGATTCCCTCCCCTCCGATTAACCGCAACGTCGTCGGCCTGTTCGTCTTCTTCTTCTTCATCGGCGTCCTGTTCGACAAATTGTGGACCTCGCGGCGGCGGAACAAGAACAGCGGCGGCGAGGACGGGCTGCGCGGCGTGTGGCCGCAGGTGCCGACGAGCTTCTCGCTGTTTCTGGAGAAGGATTTGCAGAGGAAGGAGTCGGTGGAGTGGGTGAACATGGTGCTGGGGAAGCTGTGGAAGGTGTATAGAGGTGGAATTGAGAACTGGATCATAGGGCTGCTTCAGCCCGTCATTGATAACCTCAAGAAGCCTGATTACGTGCAGAGGGTCCAGATTAAGCAGTTCTCGTTAGGGGATGAACCCTTGTCTGTTAGGAACGTTGAGCGCAGGACTTCTCGCAGAGTCAACGATTTGCAGTACCAGATAGGCCTTAGGTATACAGGTGGTGCTCGCATGCTGTTAATGCTTTCTCTGAAATTTGGCATCATTCCAATTGTCGTACCTGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTAAGATTAATACCAACAGAACCTTGGGTGGGAGCTGTTTCATGGGCTTTTGTTTCACTCCCAAAGATCAAGTTTGAACTGTCTCCATTCCGTCTGTTCAATTTAATGGCAATTCCAGTTCTCTCGATGTTTTTGACTAAACTTCTCACTGAAGATTTACCTAAACTATTTGTACGCCCAAAGAAAATAGTTTTAGATTTCCAAAAGGGAAAAGCTGTTGGTCCGGTTGCTAATGGTGTTAAATCTGGAGAAATGCAAGAAGGAAACAAGGATTCTGTGGGTGAACTATCTGTTACTCTGGTGGATGCTCGAAAGCTTTCTTATATTTTTTATGGCAAGACAGATCCTTATGTTATTCTTAGCCTTGGAAATCAAGTAATACGCAGCAAAAAGAACAGTCAAACTACTGTAATTGGACCCCCTGGAATGCCAATTTGGAATCAGGATTTTCATATGCTTGTTTCCAACCCTAGAAAGCAGAAGTTATTCATCCAAGTAAAGGACGCTCTAGGATTTGCAGATTTGACTATTGGTACAGGAGAGGTTGATTTAGGATCTCTTAAAGACACTGTTCCAACAGATAGAATTGTGGTTTTACAAGGAGGTTGGGGATTTTTAGGAAAGCGCTCTTCTGGGGAGATATTACTTCGGCTAACATATAAAGCATATGTGGAGGATGAGGAAGATGATAAAACTGAGATGGATTCCATTTATACTGATGTTTCTGATGACGAGTTGTCTGATTCCGAAGCAAATGTTACTAATGAGAAGGATGAAAGAGATTCTGTGTATGAAACAGATAAAGAGTCATTTATGGATGTTTTGGCAGCATTAATTGTTAGCGAAGAATTTCAGGGGATAGTAGCATCTGAAACAGGGTTTAGCAAAGTTTTGGATAATGGCTCAAATGCTGGATCTAAAGTGTCAAAATCTCCAGTTCCCAATGTTGAACCAATTCCTTCTAGTTCTGATAATTCCGAAGGCTCTGGAGGGTCAGCTTTACTTTGGCTTGCTGTGATTGCTAGCATATCACTACTAATTGCTCTCAATGTTGGGGGATCCAGTCTCTTCAATCCTTAA 2040 0.4529 MILQHASPISHFHFSPLSPCSSNTQLKSFLAFPFSKRRRKRLFANSGSRKFRRKCTVRFCAVPSDATPNRNWNAEFARSFVLKRISNELESDNNNDNDTELQAPPSPPPVQLGSNFTGFREDPIVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFIGVLFDKLWTSRRRNKNSGGEDGLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDNLKKPDYVQRVQIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPKLFVRPKKIVLDFQKGKAVGPVANGVKSGEMQEGNKDSVGELSVTLVDARKLSYIFYGKTDPYVILSLGNQVIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPRKQKLFIQVKDALGFADLTIGTGEVDLGSLKDTVPTDRIVVLQGGWGFLGKRSSGEILLRLTYKAYVEDEEDDKTEMDSIYTDVSDDELSDSEANVTNEKDERDSVYETDKESFMDVLAALIVSEEFQGIVASETGFSKVLDNGSNAGSKVSKSPVPNVEPIPSSSDNSEGSGGSALLWLAVIASISLLIALNVGGSSLFNP 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01967 679 Gene3D C2 domain 398 543 IPR035892 -
Pumo11g01967 679 ProSiteProfiles C2 domain profile. 401 517 IPR000008 -
Pumo11g01967 679 SMART C2_3c 415 516 IPR000008 -
Pumo11g01967 679 MobiDBLite consensus disorder prediction 570 584 - -
Pumo11g01967 679 CDD C2 416 510 - -
Pumo11g01967 679 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 201 388 IPR031468 GO:0008289
Pumo11g01967 679 CDD SMP_SF 223 386 - -
Pumo11g01967 679 Pfam C2 domain 414 510 IPR000008 -
Pumo11g01967 679 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 414 543 IPR035892 -
Pumo11g01967 679 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 47 679 - -
Pumo11g01967 679 MobiDBLite consensus disorder prediction 621 647 - -
Pumo11g01967 679 MobiDBLite consensus disorder prediction 560 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01967 Pumo-Chr11 51565590 51571984 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01967 - - gmx:100817508 1165.6