Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01965 ATGTCAGCTGAAAAGGGCGGAAAAGAGCGAAAGGCCACAACACATTCATTCCTGTGTTTCCGTTCCCGCCATTGCAAAGGGGAGGAAATGGCTTCCGCGTCGTCGAGAACCCTAACGGACTTTTTCCAACCCGCTTCGAAGCGCTTGAAGCCCACTCTCCCCCCATCCTGCAAATCTGACGACGCCAATGCCTCCACGCTCTCCCTCGACCAAAAGTCGCGCGTCGAATACAACAAGCTCCTTGCCAAGTCCAAGAGGAATCTCAAGCTCTGCGTCGAGAGGGTCTCCAAAAGCAAAGAATCAGGCTCAGGAGGTGGCGTCAAGCTGGAGGAGCTGCTGGTGGAGGAAACGTGGTTGGAAGCTCTCCCTGCTGAACTCCAAAAACCCTATGCCCTCACTCTCTCCAAATTCGTCGAAAGTGAGATTTCCAGCGGAGACGACGTCGTTTTCCCTCCCACGCACTTGATTTTCAACGCTCTCAACTCTACGCCTTTTCATAGAGTGAAAGCTGTCATCCTTGGTCAGGACCCTTATCATGGGCCTGGTCAAGCAATGGGGCTTTCATTCTCAGTTCCTGAGGGAGTCAAAGTGCCTTCCAGTTTGGTGAATATATTCAAGGAGCTTCACAAAGACCTTGGTTGCTCCATTCCACCTCATGGAAATCTTCAAAAATGGGCTGTGCAGGGTGTTCTCTTACTCAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAATTCTCATGCCAAAAAAGGCTGGGAACAGTTTACAGATGCTGTTATCAAGACAATCTCACAGAAGAAGGAAGGAGTTGTGTTTCTGTTGTGGGGAAACTCTGCTAGGGAGAAATCTAGGTTAATTGATGCAACAAAGCATCATGTTCTTACAGCTGCACATCCTTCTGGTTTGTCTGCAAATAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCGCACTAACCAACTTCTGGAGCAAATGGGGATGGATCCCATAGATTGGCAACTATAA 1002 0.493 MSAEKGGKERKATTHSFLCFRSRHCKGEEMASASSRTLTDFFQPASKRLKPTLPPSCKSDDANASTLSLDQKSRVEYNKLLAKSKRNLKLCVERVSKSKESGSGGGVKLEELLVEETWLEALPAELQKPYALTLSKFVESEISSGDDVVFPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIFKELHKDLGCSIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSANRGFFGCRHFSRTNQLLEQMGMDPIDWQL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01965 333 FunFam Uracil-DNA glycosylase 108 333 - -
Pumo11g01965 333 ProSitePatterns Uracil-DNA glycosylase signature. 169 178 IPR018085 GO:0006281|GO:0016799
Pumo11g01965 333 PANTHER URACIL-DNA GLYCOSYLASE 46 333 IPR002043 GO:0004844|GO:0006281|GO:0006284
Pumo11g01965 333 Hamap Uracil-DNA glycosylase [ung]. 115 332 IPR002043 GO:0004844|GO:0006281|GO:0006284
Pumo11g01965 333 SMART UDG_2 161 321 IPR005122 -
Pumo11g01965 333 Gene3D - 97 333 IPR036895 -
Pumo11g01965 333 SMART UDG_2_a 161 321 - -
Pumo11g01965 333 NCBIfam uracil-DNA glycosylase 116 325 IPR002043 GO:0004844|GO:0006281|GO:0006284
Pumo11g01965 333 CDD UDG-F1-like 130 331 IPR002043 GO:0004844|GO:0006281|GO:0006284
Pumo11g01965 333 SUPERFAMILY Uracil-DNA glycosylase-like 113 333 IPR036895 -
Pumo11g01965 333 Pfam Uracil DNA glycosylase superfamily 166 320 IPR005122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01965 Pumo-Chr11 51549210 51553382 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01965 K03648 - gmx:100818241 535.028