Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01952 ATGATAGATTCAAATCCACCACTCATGCAACACTATGGGGCACTTGTGAGAAATTCTGGTGAAGCCAAGCAGGCTAAAACTTTTAATGATCAAAACCATCCTGTGGTGGATGCATATGACCTACCTTTGATAGACCTTAGTGGTCTTGAAAGTTGTAATGAAAGAGAAAGGAGGGCTTGCACTGCAGCAATATGCAAGGCAGCATCAGAATGGGGATTTTTCCAAGTGGTGAACCATGGGATAAGCCATGACTTGCTAAGGAAAATGTGGGAAGAACAAGTGAAGTTGTTTGAAGTACCGTTTGAGAAGAAGGTCACTTGCGGGCTTCTAAATAACCCATATAGGTGGGGGACACCAACAGCTACTCGTTCAAATCACTTCTCATGGTCTGAAGCTTTCCACATTCCTCTCACCATGATCTCAGAAGCTGCTTCCTGGGGTGAATTCACTTCTTTGAGGGAAGCAATAAATGAGTTTGCACCAGCGATGCTAGAAGTATCTAGGTTGTTGGCCAGCATTCTAGCACAGAACCTGGGCTACTCAGAGGATGCAGTTGAAAACCTTTGTGATGCAGGCACATGCTTTCTGCGATTAAATCACTATCCATGCTGCCCTAAATCTAAAGATGAAATTTTTGGATTAGTGCCTCACACTGACAGCGACTTCCTTACAATCCTTTATCAAGATCAAGTCGGTGGACTCCAACTCATGAAAGATTCCAAATGGGTCGCTGTAAAACCAAACCCTGATGCTCTAATTGTTAACATTGGGGACCTTTTCCAGGCTTGGAGTAATGATGAGTACAAAAGCGTGGAGCACAAGGTTGTGGCAAATAACAAAATGGAAAGAAACTCCATAGCATATTTCCTATGTCCTTCTTACAGTACTGTCATAAACGGCTGCAAAGGACCTTCTGTATATAGGAAGTTCACGTTTGGAGAATACAGACACCAAATTCAAGAAGATGTCAAGAAAATAGGACACAAAATTGGACTATCAAGATTTCTACTTTAA 1014 0.4221 MIDSNPPLMQHYGALVRNSGEAKQAKTFNDQNHPVVDAYDLPLIDLSGLESCNERERRACTAAICKAASEWGFFQVVNHGISHDLLRKMWEEQVKLFEVPFEKKVTCGLLNNPYRWGTPTATRSNHFSWSEAFHIPLTMISEAASWGEFTSLREAINEFAPAMLEVSRLLASILAQNLGYSEDAVENLCDAGTCFLRLNHYPCCPKSKDEIFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVKPNPDALIVNIGDLFQAWSNDEYKSVEHKVVANNKMERNSIAYFLCPSYSTVINGCKGPSVYRKFTFGEYRHQIQEDVKKIGHKIGLSRFLL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01952 337 SUPERFAMILY Clavaminate synthase-like 35 320 - -
Pumo11g01952 337 Gene3D - 14 325 IPR027443 -
Pumo11g01952 337 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 135 IPR026992 -
Pumo11g01952 337 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 41 317 - -
Pumo11g01952 337 Pfam 2OG-Fe(II) oxygenase superfamily 195 292 IPR044861 -
Pumo11g01952 337 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 190 292 IPR005123 -
Pumo11g01952 337 FunFam Gibberellin 2-beta-dioxygenase 8 39 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01952 Pumo-Chr11 51412690 51415615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01952 27 315 Glycosyltransferase AT5G59530 31.046 7.42e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01952 K04125 - gmx:100809329 663.685