Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01943 ATGGTGGATGGAAACTCTGGTTTGGTGAGTGAGAAGGCTGAAATTGATGATTCTGAATTCATGACTCCTAGAGAAAATGGTGGTATAATATTGGACAATGGAAGCACAGACAAGGTGGATGGTGTTGCTACTGAGGCTATTATGGAATCTGAATCCAGTGAGGTGATTCCATCCCAAGGTACTGATGATGCTGGGGACTTGAAGGAGTGTGGCTCAGATCCTGAACTTGGAGATGACAAGATAGAGGTAAAGTTAAATGCTTCAGCTGATCCTTCTGGTGAGATACAAGATGATACATGTGAAGAAGTACACGACAATTCAGCTCATGTGACTTTAGAACATCAAGATGCAGTAACTAGGGATATGAAGGATGATTCTCTGGGCAGTAATACAAGTCACGATGATAGAAATGGTGAAGAAATGAGTACCGATGGCATTCAAAATACTGACGTAAGAGATTATAGAAATGGCGATGCTGAAGCTGGAAGCTCATCCTTTTTGGAAAATTCCTCTACTAATCAGACACCGTCTATTCAGGAGGCTAGTGCAGCTGAGCCAAAGGAAGCAAGTAATAAGGATGATCAATCTCAGATTTCTGATGAAGAGCATAGAGATCATGACTCCTCTTCTGTGGTTGAGGAGCCTGAAAGGATACAGGAGAAGATTATGGAACAGACAGAAACCACTCAAGTGACTGGAGAGCAACATGTTCAACCTGCAGCAGATATTTCTTCTTCATCTGAAAGATCTGCTGGTACTGTGCCTACTCCTGTCCCTCCCTCATCTGAAAGTTCTGCTGCTGCTGGGCCCACTCCTGTTCCAGCTGGCCTTGGTCGTGCAGCCCCATTGCTGGAACCTGCATCTCGGGTAGTGCAGCAGCCTCGTGCTAATGGTACTGTATCTAATACTCAGTCCCAGCAAATGGAGGACGCCTCGAGTGGGGAGGCTGAGGAGTATGATGAGACACGCGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGTTGGCTCATAGGCTTGGGCAAACACCCCATAATGTTGTTGTAGCTCAAGTTTTATATAGATTAGGACTGGCAGAGCAACTCAGAGGAAGGAATGGGGGGCGTGTGGGTGCTTTTAGCTTTGATCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCAGCAGGTCAGGAACCACTTGATTTCTCTTGTACAATAATGGTCCTTGGAAAGACGGGAGTTGGTAAAAGTGCTACCATCAATTCTATTTTTGATGAGGTTAAGTTTAATACCAGTGCTTTTCATATGGGAACCAAGAAGGTTCAGGATGTTGTGGGAACAGTGCAGGGCATTAAGGTACGGGTCATTGATACGCCGGGACTTCTACCTTCCTGGGCAGACCAGCGAAGCAATGAGAAGATCCTCCACTCTGTTAAGCACTTTATTAAGAAAACTCCACCTGATATTGTGTTGTATCTTGATAGGTTAGATATGCAGAGCAGGGATTTTAGTGATATGCCACTCTTACGCACAATTACTGAAATTTTTGGGCCATCTATTTGGTTCAATGCCATTGTGGTTCTGACTCATGCAGCATCTGCTCCTCCTGAAGGCCCTAATGGTACTGCTTCCAGTTATGACATGTTTGTTACTCAGCGTTCTCATGTTGTGCAGCAAGCCATTCGTCAAGCAGCTGGTGACATGCGTCTCATGAATCCTGTATCCTTGGTGGAGAACCATTCTGCTTGCAGAACAAATAGGGCTGGCCAGAGAGTATTGCCAAATGGCCAGGTTTGGAAACCTCATTTGTTACTTCTATCTTTTGCCTCTAAAATTCTGGCTGAAGCAAATGCTCTTCTCAAGTTACAAGATAGTCCACCTGGGAAGCCTTATATAGCTCGAGCAAGAGCGCCTCCATTACCTTTTCTTTTGTCAACCCTTCTCCAGTCAAGACCGCAATTGAAGTTGCCAGAGGAGCAGTTTGGTGATGAGGACAGTCTTGATGATGACCTTGATGAATCATCAGAGTCTGATGATGAAAATGAACATGATGACTTGCCGCCATTTAAACCTTTAACTAAGGCCCAGGTGGAAAAGCTGTCTAAAGCTCATAAGAAAGCATATTTCGATGAGTTAGAGTATAGAGAAAAGCTTTTGATGAAGAAGCAATTGAAGGAAGAAAAAAAGCGACGGAAAATGATGAAGAAAATGGCAGAATCAGCAAAAGATCTGCCAAGTGACTATAGTGAAAATGTGGAAGAAGAAAGTGGTGGTGCAGCTTCTGTTCCTGTTCCCATGCCAGATTTGGCCCTGCCTGCTTCTTTTGATTCTGATAACCCCACTCATCGGTATCGTTATCTTGATTCATCATCAAATCAGTGGCTTGTAAGACCTGTTCTAGAAACTCACGGATGGGATCATGATGTGGGTTATGAAGGGTTGAATGTAGAAAGATTGTTCGTTGTCAAGGACAAGATACCTTTATCTTTCACGGGTCAGGTTACTAAAGATAAAAAGGATGCTAATGTTCAGATGGAAATATCCAGTTCAATTAAGCATGGGAAAGGTAAAGCAACTTCATTAGGTTTTGATATGCAAACTGTGGGGAAGGACTTGGCTTATACATTACGCAGTGAGACAATATTTACTAATTTTAGAAGAAATAAGGCAACTGCTGGTCTCTCATTTACTTTACTTGGTGATGCCTTGTCATCTGGATTCAAGATTGAAGACAAATTGGTTGCTAGTAAGCGATTCAAGCTGGTTGTCAGTGGTGGTGCAATGACAGGGCGTGGTGACATTGCTTATGGTGGCAGTTTGGAGGCCCAACTGAGAGATAAGGATTACCCTCTTGGTCGTTTCTTAACTACGCTTGGCCTTTCTGTTATGGATTGGCATGGAGATCTTGCTGTTGGGTGCAATGTGCAATCTCAGATCCCAGTAGGACGACTTACAAACCTTGTTGCGCGGGCCAATTTGAACAATCGAGGGGCAGGACAAATAAGTATTCGATTAAATAGTTCAGAACAGCTTCAAATTGCTTTGATTGGACTCATCCCTCTCGTAAAGAAGCTAGTTGGTTATCCTCAACAATTGCAGTTTGGACAATAA 3090 0.4369 MVDGNSGLVSEKAEIDDSEFMTPRENGGIILDNGSTDKVDGVATEAIMESESSEVIPSQGTDDAGDLKECGSDPELGDDKIEVKLNASADPSGEIQDDTCEEVHDNSAHVTLEHQDAVTRDMKDDSLGSNTSHDDRNGEEMSTDGIQNTDVRDYRNGDAEAGSSSFLENSSTNQTPSIQEASAAEPKEASNKDDQSQISDEEHRDHDSSSVVEEPERIQEKIMEQTETTQVTGEQHVQPAADISSSSERSAGTVPTPVPPSSESSAAAGPTPVPAGLGRAAPLLEPASRVVQQPRANGTVSNTQSQQMEDASSGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFHMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWADQRSNEKILHSVKHFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYIARARAPPLPFLLSTLLQSRPQLKLPEEQFGDEDSLDDDLDESSESDDENEHDDLPPFKPLTKAQVEKLSKAHKKAYFDELEYREKLLMKKQLKEEKKRRKMMKKMAESAKDLPSDYSENVEEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVKDKIPLSFTGQVTKDKKDANVQMEISSSIKHGKGKATSLGFDMQTVGKDLAYTLRSETIFTNFRRNKATAGLSFTLLGDALSSGFKIEDKLVASKRFKLVVSGGAMTGRGDIAYGGSLEAQLRDKDYPLGRFLTTLGLSVMDWHGDLAVGCNVQSQIPVGRLTNLVARANLNNRGAGQISIRLNSSEQLQIALIGLIPLVKKLVGYPQQLQFGQ 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 162 181 - -
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 722 744 - -
Pumo11g01943 1029 Coils Coil 717 737 - -
Pumo11g01943 1029 ProSiteProfiles AIG1-type G domain profile. 394 623 IPR006703 GO:0005525
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 648 684 - -
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 292 312 - -
Pumo11g01943 1029 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 396 945 IPR045058 -
Pumo11g01943 1029 CDD Toc34_like 369 614 - -
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 66 85 - -
Pumo11g01943 1029 Gene3D - 365 614 IPR027417 -
Pumo11g01943 1029 NCBIfam chloroplast protein import component Toc86/159, G and M domains 274 1020 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Pumo11g01943 1029 Pfam AIG1 family 397 530 IPR006703 GO:0005525
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 1 321 - -
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 186 223 - -
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 725 742 - -
Pumo11g01943 1029 FunFam Translocase of chloroplast 120, chloroplastic 369 616 - -
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 97 141 - -
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 655 675 - -
Pumo11g01943 1029 MobiDBLite consensus disorder prediction 224 268 - -
Pumo11g01943 1029 Pfam Translocase of chloroplast 159/132, membrane anchor domain 755 1019 IPR024283 -
Pumo11g01943 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 531 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01943 Pumo-Chr11 51334208 51337297 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01943 - - gmx:100810931 1798.48