Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01862 ATGGTTTCTCTACTAAACCCAGAAGCACCGGAATTTTTCCCAAGCCATAACCACAAGCTTCAGCAACAACAACTTCCCTACACCAATTTGTCCACTTCTCATCACTTCTTCTTCATTGTCTCTGCCTATCCCTCACGACAACTTCCCCACCCTTTCTACTATCCCACCACAACACTTCCACCGCCACCACCTTCCATTCCCTTTCACGATGCCACCATAACCAACCCGCTAGCACTCGAAGCTGAACCAGCTCCTTTTCATAACATCAAAGATGACCCTAACCCCGTTGATGCAGTGCACCAGAAGAAGGGTCAGGTGCTTGTAGCTGAACCCAAAACGGGTGGTTCAAAAGGGCTTGTACAAAAGCAGGTGTTTAAGCCGTATGGAAGTTTCAGAATGAAGGGTTGCCCGCCGAGAAGGAAGTTTGCAGAAGATGGTCAACGCAAAAGTGTTGACTTTTTGAGGAACAAGTGCTTCAGGGGTTTCCCTAAGAGGAAACCTTATTCTCCTTTGATGCCTTTTAGGGATGGCGGGAACGAAACCACTGTGATGATCAGAAATATTCCTAGCAAATACACCCGAGGCACGCTGGTAGAGTTTCTGGAAAAGCACTGTAAGCAGGTGAATGTAAGAGAAGAATCAGCTGACAAAGAGAAAGGAGAAGAATCCAGTTATTTAGCTTTTGATTTCGTTTATTTGCCCATTGATTTCATAACTGGGATGAACAAGGGTTACGCCTTTGTGAACTTCACCAAGCCCAAGGCAGCTTGGAAGTTTCTTATGACAGCCTCCAATTCGAAATGGGACTTGTTCCAGTCCCACAAGATACGTGAAGTGGTTGCTGCACGTTTACAGGGTAAGGAAAAATTGGAGCGACATTTTGAAACAATGAATTTTCCCTGTGATTCGGAGGATGTTCTGCCCGTGAGCTTTAGCCCACCTCGCGATGGTGTAAACAAGGGAGAGCAAAGGACTATGGGGAACCTTATGAAGCGTCAACAAAATTCCACGAATAGGTTGGGTGGACCCTGGCCACTTGATCCCATGATCCAGGTTGTGTGGTGGGTTCCACCCTTCTTGTGGATAGATAGATTGAGGCTCAACTCTCAAAAGCCTCAAGCTTCTAGGGATATGATGGTTTAG 1143 0.4637 MVSLLNPEAPEFFPSHNHKLQQQQLPYTNLSTSHHFFFIVSAYPSRQLPHPFYYPTTTLPPPPPSIPFHDATITNPLALEAEPAPFHNIKDDPNPVDAVHQKKGQVLVAEPKTGGSKGLVQKQVFKPYGSFRMKGCPPRRKFAEDGQRKSVDFLRNKCFRGFPKRKPYSPLMPFRDGGNETTVMIRNIPSKYTRGTLVEFLEKHCKQVNVREESADKEKGEESSYLAFDFVYLPIDFITGMNKGYAFVNFTKPKAAWKFLMTASNSKWDLFQSHKIREVVAARLQGKEKLERHFETMNFPCDSEDVLPVSFSPPRDGVNKGEQRTMGNLMKRQQNSTNRLGGPWPLDPMIQVVWWVPPFLWIDRLRLNSQKPQASRDMMV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01862 380 Gene3D - 140 290 IPR012677 -
Pumo11g01862 380 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 181 283 IPR000504 GO:0003723
Pumo11g01862 380 Pfam RNA recognition motif 2 226 294 IPR007201 -
Pumo11g01862 380 SUPERFAMILY RNA-binding domain, RBD 162 268 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01862 Pumo-Chr11 50419408 50421427 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01862 - - gmx:102662025 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01862 11 50419408 50421427 Pumo11g01862 11 50419408 50421427 ECH