LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo11g01848	ATGCTGAAGATGCAGATGAAAACCACCCACCTAGCTGGTTTCATGAAGAAACCTGTACAGGAAGCTACTGCAATGACGGGGAACACATGGAGAATATTGAATTGGATGAGTCCGATTCCCAATACAGTAGTGATATGGACTGGGAGGAGGAACACTTCGGCGAATTCAACTATGAAGATGATACTAGGTTCTTCCATTTGCTCAATGGTGGAGACCGACTCAAAACTTCAGTCCTTATCAGAGAGTTCGCATGATATATCTGATGTGTGGTCAGATGACATCTTTAGCAGCCATTATGCGGACATTCTGGTTGAAGAGGAGAGACTCCAAGAAGCCGAAGAAGAGAAAAGCACCTGTTTTGAAGCACAACCTCATTGCACTAATTGTGTCCTTGAAGACACAAGTGAAAGCATCGAGTTTATGACTCAAGAAACAGATTACCCATCCAATGGTATAAGTTCTGAGTATGACCAATCTACTTCGACTGAGGAAGTATTTCAGCATCTGACCAATGCAGAAGATAACAATAGAGAAAATGAAAAACATGTGGATTATGAGGTCGGTTGTGTCTCAATGGTACTTGATGAAGAGAAAATTGAAAATAGTGAAAGTTGCGAGATTGACGAGAGCAGTGAAGACAGAAATGCAAGCCTAGAGAATGATGACGATGGAATTAGCCAGGAGAACCAAATTCACTCGTCTGAAGTGCCTGAAGAAAGCACCATCATTCTTCAGGAGGAAAATGAAGTTAAAGGTAGCAAGTTGCAGAGCACAGGTGGTGAAGAGCAGCACACAAGCAAGAGTTGGCAATGGGGAACTAAGCGCAAGAGACCTGTGGAAGAGGACGAGGAAATGAGAAAGATCAACCCACGAAAGCCAAATTTCCTGCCCTTGGTTGCTGAGCCAGAACCAGAGAAAGTTGACCTGAAGCACCTAATGATAGATGAAAGAAAAAATGCAGAGGAATGGATGCTTGATTTCGCACTCAAACAAACTGTCACGAGACTTGCTCCAGCAGGGAAAAGGAAGGTATCATTGCTAGTTGAAGCTTTTGAAACAGTATTGTCAATGCCCAAATGCGAAGCCCATATGAGAAATGATTCACCCTTTGCTCATGCAAGACCTATTCAAGCGTGTAGCTGA	1143	0.4313	MLKMQMKTTHLAGFMKKPVQEATAMTGNTWRILNWMSPIPNTVVIWTGRRNTSANSTMKMILGSSICSMVETDSKLQSLSESSHDISDVWSDDIFSSHYADILVEEERLQEAEEEKSTCFEAQPHCTNCVLEDTSESIEFMTQETDYPSNGISSEYDQSTSTEEVFQHLTNAEDNNRENEKHVDYEVGCVSMVLDEEKIENSESCEIDESSEDRNASLENDDDGISQENQIHSSEVPEESTIILQEENEVKGSKLQSTGGEEQHTSKSWQWGTKRKRPVEEDEEMRKINPRKPNFLPLVAEPEPEKVDLKHLMIDERKNAEEWMLDFALKQTVTRLAPAGKRKVSLLVEAFETVLSMPKCEAHMRNDSPFAHARPIQACS	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo11g01848	380	PANTHER	CALMODULIN-BINDING PROTEIN-RELATED	78	356	IPR044681	GO:0005516
	Pumo11g01848	380	MobiDBLite	consensus disorder prediction	199	285	-	-
	Pumo11g01848	380	Pfam	Plant calmodulin-binding domain	267	356	IPR012417	GO:0005516
	Pumo11g01848	380	MobiDBLite	consensus disorder prediction	229	267	-	-
	Pumo11g01848	380	SMART	CaM_binding_2	247	356	IPR012417	GO:0005516
	Pumo11g01848	380	MobiDBLite	consensus disorder prediction	199	228	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo11g01848	Pumo-Chr11	50308802	50309944	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo11g01848	261	380	Calmodulin-binding Proteins	AT2G38800	50.413	9.15e-31	121

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo11g01848	-		-	gmx:102670203	515.383