Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01841 ATGCTCGTGTTGTTTGAAACCCCTGCGGGTTTTGCCCTATTTAAAGTGCTGGATGAAGGCAAGCTTTCTAAAGTTGAGGACTTGTGGAAGAACTTTTCCAGCGCAGATACTGCTAGACAGGTGGTCAAGTTGAAAGCATTTTCTAAATTTGAGAACACTTCAGAAGCTCTTGAGGCAGCTACTTTACTTATTGATGGAAAAGCTAGCAAGGGTCTGCGCAAGTTCCTGCGTGCTCATTGTGAAAATGAAACACTAGGTGTGGCTGATTCAAAGCTTGGGAATGTGATCAAGGAGAAATTGAAAATCGACTGTATTCACAACAATGTAGTTATGGAGTTGATGAGAGGTGTTAGAAATCAGTTAACTGAACTTATATCTGGTCTAGCTGTTCAAGACATGGCCCCAATGAGCTTGGGTTTATCTCATAGCTTATCCAGATACAAGTTGAAGTTTAGTGCAGAGAAGGTGGATACCATGATTGTCCAGGCCATTGGTTTACTTGATGATCTTGATAAAGAGTTGAATACCTATGCCATGAGGGTTCGAGAATGGTATGGTTGGCATTTCCCAGAGCTTACTAAAATAATACAGGATAACATCCAATATGCCAGGGCAGTCAAGTTGATGGGTGATCGTGTTAATGCAGCTAGCCTTGATTTCTCTGAGATTTTGCCAGAGGAAGTTGAGGCAGAGCTGAAGGAGGCAGCCGTGATATCTATGGGAACTGAAATTGGTGAGCTTGACTTGGCAAATATTAGAGAACTCTGTGACCAGGTTTTGTCTCTTTCAGAATACAGGGCACAACTCTATGATTATCTTAAGAGTAGAATGAACACCATTGCACCCAATTTGACTGCGCTGGTTGGGGAGCTTGTTGGTGCTCGCCTCATTGCCCATGGTGGTAGCTTATTAAATCTTGCAAAGCAGCCTGGTAGTACTGTGCAGATTCTTGGTGCTGAGAAGGCTCTCTTTAGGGCACTGAAGACTAAGCATGCTACTCCCAAGTATGGTCTTATATACCATGCATCCTTGATTGGTCAGGCAGCTCCAAAGTTCAAGGGGAAAATTTCTCGTTCACTTGCTGCTAAGACGGCATTGGCTATTAGGTGTGATGCTCTTGGAGATGGCCAAGATAACACCATGGGATTGGAGAACAGAGCCAAGCTTGAAGCACGATTGAGGAACCTTGAAGGCAAAGAGTTAGGTCGTTTTGCTGGTTCTGCCAAGGGAAAGCCCAAGATAGAAGCATATGACAGGGACCGAAAGAAAGGAGCCGGAGGACTGATAACCCCAGCTAAGACATATAATCCTTCAGCTGATTCAGTTATCGGGCAAATGGTCAATGCTGCTATGGATGAAGATGCACAAGAGCCTTCTGTTACTGATAAAAAGAAAGAAAAGAAAGAAAAGAAGGAAAGGAAGAAAAAGAAGGAGAAAAATGAAGAGGAGGCAGCTGATGAAGATGTTGGTGAGGAACCAGAACCTGAAGTTGTGAAAAAAGAAAAGAAGAAGAAAAGGAAGGAAGCTCCTGAGAGTGCTGAGTTGCAGAATGGGAATGACGATAATGCAGGAGAAAAGAAGAAAAAGAGGAAAAACCACGCAGAGCAGGAAGAATCTCCTGAAATGCCAAGCAAGAAGAAAGGGAAAAAAAAGAAAAGTGAGGACTAA 1668 0.4323 MLVLFETPAGFALFKVLDEGKLSKVEDLWKNFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRAHCENETLGVADSKLGNVIKEKLKIDCIHNNVVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSAEKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNIQYARAVKLMGDRVNAASLDFSEILPEEVEAELKEAAVISMGTEIGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDRDRKKGAGGLITPAKTYNPSADSVIGQMVNAAMDEDAQEPSVTDKKKEKKEKKERKKKKEKNEEEAADEDVGEEPEPEVVKKEKKKKRKEAPESAELQNGNDDNAGEKKKKRKNHAEQEESPEMPSKKKGKKKKSED 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01841 555 MobiDBLite consensus disorder prediction 407 438 - -
Pumo11g01841 555 Coils Coil 460 488 - -
Pumo11g01841 555 MobiDBLite consensus disorder prediction 452 555 - -
Pumo11g01841 555 FunFam Nucleolar protein 58 284 405 - -
Pumo11g01841 555 MobiDBLite consensus disorder prediction 493 555 - -
Pumo11g01841 555 FunFam Probable Nucleolar protein 58 129 283 - -
Pumo11g01841 555 Pfam snoRNA binding domain, fibrillarin 166 394 IPR002687 -
Pumo11g01841 555 MobiDBLite consensus disorder prediction 412 426 - -
Pumo11g01841 555 SUPERFAMILY Nop domain 153 397 IPR036070 -
Pumo11g01841 555 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 552 IPR045056 GO:0030515|GO:0031428|GO:0032040
Pumo11g01841 555 SMART NOSIC_2 159 211 IPR012976 -
Pumo11g01841 555 Pfam NOP5NT (NUC127) domain 2 66 IPR012974 -
Pumo11g01841 555 ProSiteProfiles Nop domain profile. 280 398 IPR002687 -
Pumo11g01841 555 Gene3D - 129 284 - -
Pumo11g01841 555 Gene3D Nop domain 285 397 IPR042239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01841 Pumo-Chr11 50268746 50273193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01841 K14565 - gmx:100775301 917.146