Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01776 ATGATTGGGCGCAGAGATAGAGAGGGACCCTTGATGAGGAACAACAGCACAAACTCTCTTCGCAAATCAAGGGTCCTAACCGCAGTTGCAATTGGTGTCCTTATTGGATGCCTCTTCGCTTTTTTGTTCCCCAATGGCTTCTTCGTTTCTCACTCTGTTGCCCCGAATCGCCACTTCTCTCAAGCGGGATCTAAGACCCAGGAAAATTCAGCTGGATGTGAATCCTCGGATCGGGTCAACATGTTGAAATCAGAGTTTGTGGCGGTATCAGAGAAAAATGCTGAGATGAAAAAACAGGTGAGGGAATTGACTGAACGGCTTCGGCTTGCGGAGCAAGGGAAAGACCAGGCTCAAAAGCAGTTCCTTACATTAGGTAAACAGCCTAAAGCTGGACCTTTTGGTACTGTAAAGGGATTAAGAACCAACCCTACTGTTATTCCTGATGAATCTGTGAATCCAAGATTGGGAAAGATATTAGAGAAAGTTGCAGTTAAACGAGAGCTTATAGTTTGTCTTGCAAACACCAATGTGAAGGAGATGCTGGAGGTCTGGTTCACCAATATCAAGAGAGTTGGCTTAACCAATTATCTAGTTGTTGCTTTAGACGATGAGATTGCAAAGTTTTGTGAATCAAATCAAGTCCCAGTCTATAAAAGAGATCCAGATCATGGTGTTGATACCATTGGAAGAACAGGGAGCAACCATGCTGTCTCTGGTCTTAAATTTCGTATTCTAAGAGAATTTTTGCAGTTGGGATATAGTGTTCTTCTATCAGATGTTGACATTGTGTATTTGCAGAATCCTTTTGATCATCTATACCGGGATTCAGACGTGGAGTCCATGAGCGATGGTCATAATAACATGACAGCTTACGGCTATAACGATGTCTTCGATGAGCCTACAATGGGTTGGGCTCGATATGCTCATACTATGAGGATATGGGTTTACAACTCTGGTTTCTTCTATATCAGACCAACAATCCCTTCAATTGAGCTTTTGGATCGTGTGGCAACACGACTTTCGAAGGAGACTGCATGGGACCAGGCTGTTTTCAATGAGGAACTCTTTTACCCCTCACATCCTGGTTATGATGGGCTTCATGCTGCCAGAAGAACTATGGATATGTATCTCTTCATGAACAGCAAGGTTCTGTTCAAGACAGTGAGGAATGATGCTAACCTCAGCAAATTGAAGCCAGTAATTATTCATGTGAATTACCATCCTGATAAACTTCCCAGAATGAAAGCAATTGTTGAATACTACGTTAATGGGAAGCAGGATGCTCTCAAACCTTTCCCTGATGGCTCAGATTGGTAA 1317 0.429 MIGRRDREGPLMRNNSTNSLRKSRVLTAVAIGVLIGCLFAFLFPNGFFVSHSVAPNRHFSQAGSKTQENSAGCESSDRVNMLKSEFVAVSEKNAEMKKQVRELTERLRLAEQGKDQAQKQFLTLGKQPKAGPFGTVKGLRTNPTVIPDESVNPRLGKILEKVAVKRELIVCLANTNVKEMLEVWFTNIKRVGLTNYLVVALDDEIAKFCESNQVPVYKRDPDHGVDTIGRTGSNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHNNMTAYGYNDVFDEPTMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKETAWDQAVFNEELFYPSHPGYDGLHAARRTMDMYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYHPDKLPRMKAIVEYYVNGKQDALKPFPDGSDW 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01776 438 Pfam Nucleotide-diphospho-sugar transferase 193 411 IPR005069 -
Pumo11g01776 438 Coils Coil 86 120 - -
Pumo11g01776 438 SUPERFAMILY Nucleotide-diphospho-sugar transferases 169 373 IPR029044 -
Pumo11g01776 438 PANTHER ARABINOSYLTRANSFERASE RRA3 1 437 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01776 Pumo-Chr11 49377602 49380196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01776 K20783 - gmx:100804189 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01776 11 49377602 49380196 Pumo11g01776 11 49377602 49380196 ECH