Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01773 ATGGAGAAGGTTATGATTGTGGGGATGGTGTTGGCCATAGTGATGATTGTTGGGTCAGGGCCCATGATGGCCAATGCCCAATCATTTTGTCGCATGCCCAGCGATGGGTTGACGGCATGCAAGCCCAGTGTGAGTGGGGACAATCCTGTTGATCCTTCCACTGCTTGCTGCTCAGCCATTGCCAAGGCTGATCTTAAATGCTTCTGCCGCTACAAGGATTCGGGCTTGCTCTCTTTCTACGGTGTTGATCCCAACAAATGCATGGAACTCCCTGTTAAGTGCAAGGTTGTGGACTCTTTCCACTGCTAG 309 0.5113 MEKVMIVGMVLAIVMIVGSGPMMANAQSFCRMPSDGLTACKPSVSGDNPVDPSTACCSAIAKADLKCFCRYKDSGLLSFYGVDPNKCMELPVKCKVVDSFHC 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01773 102 CDD nsLTP_like 30 102 IPR044741 -
Pumo11g01773 102 SMART aai_6 30 102 IPR016140 -
Pumo11g01773 102 PANTHER LIPID BINDING PROTEIN-RELATED 9 98 IPR039265 GO:0005504|GO:0009627
Pumo11g01773 102 Pfam Probable lipid transfer 19 101 IPR016140 -
Pumo11g01773 102 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 100 IPR036312 -
Pumo11g01773 102 Gene3D - 26 102 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01773 Pumo-Chr11 49293153 49293944 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01773 29 102 Acyl Lipid Metabolism Gene Families AT5G48485 43.243 1.83e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01773 - - gmx:100305636 176.022