Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01766 ATGAAGGCTTTGAGCGCCATAAACTCCTCAAATCCATGTCTTCCCAAGACCCATTTCCTCAAAGTCCCTATCTTTCACCCCTTCTTCAAATTCAAGCCATTCTCATACTCATACAACACCCATGGCCATGGTGCAAAGAGAGCTCACACTCTTCCATTCACCATCAGCTGCAAGCTGAAAAGCTCTCAATACATGAAGAACAAAGGGAAGAGTGTGTCACAGAAGATTGTGTTATCAGAAGCGTCCCCACCGCCACTCACAGAGGATGATAAGAACAATGGTGACAGTGGGGATGTTCCAGAAGGCCCAAAGAAGAAGGGAAGCCCTTTTGGGGTGGTCAACATGTTGAGAAGGAAGACCTTGCAGATTCTCTCTAATTTGCCATTGGCTATTGGGGAAATGTTTGCTGTTGCTTCTTTGATGGCTTTAGGCACAATTATTGATCAAGGTGAAGCCCCTGACTTTTATTTCCAGAAATACCCTGAAGATCATCCCGTGTTTGGATTTTTTACTTGGAGATGGGTTCTCACCCTTGGTTTTGATCACATGTATTCATCTCCTATATTTCTTGGAGTGTTGGCTCTCCTGGGTGCATCCCTCATGGCCTGCACTTACACAACTCAGCTCCCCCTCATCAAGGTTTCAAGAAGATGGTCATTTTTGCACTCTGCGGAGGCCATACGTAAGCAGGAATTTTCAGAATCGTTGCCAAAAGCATCAATCCAAGATGTTGGTACTATATTGATGGGAGCTGGATACGAGGTTGTATTCTTGAAAGGGCCATCTTTATATGCTTTTAAAGGGCTTGCAGGTCGGCTGGCCCCTGTTGGAGTCCATATAGCATTGCTATTGATAATGGCCGGAGGAACTCTTAGTGCTGCTGGGAGCTTCAGAGGTTCAGTCACTGTGCCCCAGGGGCTGAATTTTGTTGTAGGTGATGTTCTGGCTCCTTCTGGCTTTCTCTCCTCTCCAACTGAGGCTTTTAATACAGAGATTCACGTCAACAAATTCTACATGGATTATTATGAGAGTGGAGAGGTTTCACAGTTCCACACCGATCTTTCCCTTCGTAACATGGATGGGAAAGAAGTAATGAGGAAAACAATCAGTGTAAATGATCCTTTAAGATATGGTGGTATCACCATATATCAGACAGATTGGAGTATTTCGGCTCTGCAAATTCTTAAGGACAATGAAGGACCTTATAACTTGGCTATGGCACCTCTACAGATCAATGGAGATAAGAAACTTTTTGGTACTTTTCTACCGGTTGGAGATATAAACTCTCCTGACGTTAAGGGAATATCTATGCTTGCTCGTGATCTGCAGTCAATTGTCCTTTATGATAAGGAAGGAAAATTTGCAGGAGTTAGACGGCCTAATTCAAAGCTCCCAATCAATATTGATGGCTCAGAAATTATCGTTGTTGATGCAATAGGAAGTAGTGGCTTGGACTTGAAGACTGACCCAGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGATCACTACTTGCATCAGCTATTTGTCTCATTCACAGATATGGGCTTTACAAGATGGGACAACAGTCTTCATTGGAGGGAAGACTAACAGAGCAAAGTTGGAATTTCCAGAGGAGATGAACCGATTACTTGACAAGGTTCCTGAAATAGTTGAGTCAAGTCTATCTAAGCAAGCTGATAGCATCAGTGGTTAG 1701 0.4356 MKALSAINSSNPCLPKTHFLKVPIFHPFFKFKPFSYSYNTHGHGAKRAHTLPFTISCKLKSSQYMKNKGKSVSQKIVLSEASPPPLTEDDKNNGDSGDVPEGPKKKGSPFGVVNMLRRKTLQILSNLPLAIGEMFAVASLMALGTIIDQGEAPDFYFQKYPEDHPVFGFFTWRWVLTLGFDHMYSSPIFLGVLALLGASLMACTYTTQLPLIKVSRRWSFLHSAEAIRKQEFSESLPKASIQDVGTILMGAGYEVVFLKGPSLYAFKGLAGRLAPVGVHIALLLIMAGGTLSAAGSFRGSVTVPQGLNFVVGDVLAPSGFLSSPTEAFNTEIHVNKFYMDYYESGEVSQFHTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIIVVDAIGSSGLDLKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFIGGKTNRAKLEFPEEMNRLLDKVPEIVESSLSKQADSISG 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01766 566 MobiDBLite consensus disorder prediction 81 110 - -
Pumo11g01766 566 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 117 547 IPR023494 -
Pumo11g01766 566 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 68 556 IPR023494 -
Pumo11g01766 566 Pfam ResB-like family 430 542 IPR007816 -
Pumo11g01766 566 Pfam ResB-like family 129 393 IPR007816 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01766 18 558 Miscellaneous Gene Families AT1G49380 67.582 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01766 K07399 - gmx:100807003 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01766 11 49246173 49249932 Pumo11g01766 11 49246173 49249932 ECH