Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01765 ATGCTATCTCCCATGGCTCTCTCTGCGCATATTTGCCGTTTCCCTGCCACACGCCCCGACACCGCGTTGCCGGAGAGTCTCACCAGAATCCGGTGCCGGAAGCCTTTCTCCGTCCGATGCTCCGGCGATGCCCCTTCCGGGTCTGTGGGTTCCGAGTTCGATCCGAAGGTGTTTCGGAAGAACCTCACTCGGAGTAAGAATTATAACCGCAAAGGATTTGGGTACAAGGAAGAGACCCTCCAACTCATGAATCGCGAGTACACCAGTGATATCATTAAGACTTTGAAGGAAAATGGGTATGAGTATACATGGGGTACTGTCACAGTGAAGCTGGCTGAAGCCTATGGATTCTGCTGGGGAGTTGAGAGGGCTGTTCAAATTGCATACGAGGCAAGAAAACAGTTTCCTACCGAGACCATTTGGATTACCAATGAAATCATCCACAACCCCACTGTTAATAAGCGGCTGGAGGAGATGAAAGTGCAAAATATTCCTCTGGAGGAAGGTGCAAAACAATTTGATGTTGTCAACAAGGGTGATGTAGTCATATTGCCGGCTTTTGGAGCAGCAGTGGAAGAGATGTTGACTTTGAGCGAGAAAAATGTTCAGATCGTTGATACAACTTGCCCATGGGTTGCAAAGGTATGGAATTCTGTTGAAAAGCACAAGCAAGGAGATTATACCTCTATAATTCATGGTAAATATGCCCACGAGGAAACTGTAGCAACTGCTTCTTTTGCTGGCAAGTATGTAATTGTGAAGAATATGGCAGAGGCTGAATATGTTTGCGACTATATTCTTGGTGGTGAATTGAATGGATCCAGTTCAACCAAAGAAGCATTTTTAGAGAAATTTAAATTTGCAGTTTCTGAGGGCTTTGATCCCGACAGAGACCTGATAAAAGCTGGCATCGCAAATCAGACAACGATGCTCAAGGGAGAGACAGAAGAGATTGGGAAACTACTGGAGAGGACTATGATGCGCAAATATGGTGTGGAGAACGTTAATGAGCACTTCATGAGCTTCAATACAATTTGTGATGCTACTCAGGAGCGACAAGATGCTATGTACAAACTAGTGGAGGACGATCTGGATCTTATGTTAGTAATTGGTGGATGGAACTCTAGCAATACATCGCACCTGCAAGAGATAGCTGAGGAACGTGGAATTCCTTCGTATTGGATTGACAGTGAGCAAAGAATTGGTCCAGGAAATAAAATAGCATACAAGTTGAACCATGGAGAGCTTGTGGAGAAAGAAAACTGGCTGCCAGAGGGTCCAATAACAATTGGTGTAACATCTGGTGCATCCACACCAGACAAGGTTGTTGAAGATGCGCTCATCAAGGTTTTTGACTTGAAACGGGAAGAAGCGATGCAACTTGCGTAG 1389 0.4528 MLSPMALSAHICRFPATRPDTALPESLTRIRCRKPFSVRCSGDAPSGSVGSEFDPKVFRKNLTRSKNYNRKGFGYKEETLQLMNREYTSDIIKTLKENGYEYTWGTVTVKLAEAYGFCWGVERAVQIAYEARKQFPTETIWITNEIIHNPTVNKRLEEMKVQNIPLEEGAKQFDVVNKGDVVILPAFGAAVEEMLTLSEKNVQIVDTTCPWVAKVWNSVEKHKQGDYTSIIHGKYAHEETVATASFAGKYVIVKNMAEAEYVCDYILGGELNGSSSTKEAFLEKFKFAVSEGFDPDRDLIKAGIANQTTMLKGETEEIGKLLERTMMRKYGVENVNEHFMSFNTICDATQERQDAMYKLVEDDLDLMLVIGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPEGPITIGVTSGASTPDKVVEDALIKVFDLKREEAMQLA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01765 462 Hamap 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 107 454 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Pumo11g01765 462 Pfam LytB protein 109 447 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Pumo11g01765 462 Gene3D - 343 461 - -
Pumo11g01765 462 PANTHER 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC 8 460 - -
Pumo11g01765 462 CDD lytB_ispH 109 447 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Pumo11g01765 462 Gene3D - 209 342 - -
Pumo11g01765 462 Gene3D - 118 208 - -
Pumo11g01765 462 NCBIfam 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 109 447 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01765 K03527 - gmx:100818067 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01765 11 49242480 49245261 Pumo11g01765 11 49242480 49245261 ECH