Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01764 ATGCCTATGGAGGCTTTCTCCCTACAGTCACTCACTGCAACCACCATTCCCTCCTCTCTGTCACGTAGAGGGGCCACTGACAAACCTTCTGCCTCCCATGTTAACCTTTCCCATTTCACGAGGTACCCTTGTACCACAAAGCACAAAATCCGTTGCACCAGAGCTCAAGCTTCAGGTTCAACAAAATCTAGTACGGGTACTGCTGAGGGGATCCCTGAGAAAACAGATTCCAAGGATGACAACTTAGTATTTGTTGCGGGTGCTACTGGTAGAGTTGGATCACGGACAGTGAGGGAGCTAATAAAGCTTGGATTTAAAGTCAGAGCTGGAGTTCGGAGTGCTCAGAGGGCTGGTGCATTAGTTCAGAGTGTTGAACAATTGAAGCTTGATGGTGCAAGTGGAGGGGGACAAGCTGTAGAGAAGCTTGAAATTGTGGAATGTGATTTGGAGAAAGCAGAAACAATTGGATCGGCATTAGGGAATGCGTCAACAGTGATATGTAGCATTGGTGCCAGCGAGAAGGAAGTTTTTGACATCACTGGACCCTTTCGGATAGATTATCAGGCCACCAAAAATCTAATTGATGCTGCAACTGTTGCCAAAGTAAATCACTTCTTATTGGTTACTTCGCTGGGAACAAACAAAATTGGCTTTCCTGCAGCTATCCTCAATTTGTTTTGGGGAGTCCTAGTTTGGAAAAGGAAGGCAGAAGAAGCACTGCTGGCCAGTGGACTTCCATACACAATAGTGAGACCTGGAGGTATGGAGCGGCCTACTGATGCTTTCAAGGAAACTCATAATATAACCCTATCAACGGAAGATACTTTATTTGGAGGTTTGGTGTCAAACCTTCAGATTGCTGAACTCCTGGCAGTCATGGCCAAGAATCGTGATCTTTCATATTGTAAAATAGTGGAGGCAATTGCAGAGACAACTGCACCGCTGACTCCCATGGAGGAACTTCTTGCAAAGATACCTTCTCAACGCCCTTACATTTCTTCACCCAAGAAACCAGATATTGCAGCTGTCAGTGTTCCAGATCCCCCTGCTAATGTCGTGACTGCAGAACCTAAAGCTGCCACTCAACAAGAAACTGCACAACCTAAACCAGTGGCAAAACAGCCACTTTCTCCCTATACCGTTTATGATGATTTGAAGCCACCATCATCTCCTTCTCCATCTCAGCCTGGTGGCGGGAAACAAACAAAGATCAGTGAGACAGTGCCAAAACCAAGTGCTTCAGATACTCCAAGTAGTGTGCCAGGAGTAGATGGCATCTCTCAGACAACATCTTCATCTAAAGTGGAGAAGCCTCTTTCTCCTTATGTAGCATATCCTGACTTAAAGCCTCCCACTTCACCATCTCCTAATGCACCATCCGTATCAGTTTCCACATCTGCTGCAGCCGGGGTGCCAGAGATAGACACAATATCAGGCAATGGACCAGCCCAACTTTCAACAGCAGATGAACCAAAGGAAGAACATCTCCCTGAACCCAAGTCAAGACCACTTTCACCTTATACAATGTATGAGGACTTGAAGCCTCCTGCATCACCATCACCTTCCTTCAGAAATTCTTAG 1581 0.4611 MPMEAFSLQSLTATTIPSSLSRRGATDKPSASHVNLSHFTRYPCTTKHKIRCTRAQASGSTKSSTGTAEGIPEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFKVRAGVRSAQRAGALVQSVEQLKLDGASGGGQAVEKLEIVECDLEKAETIGSALGNASTVICSIGASEKEVFDITGPFRIDYQATKNLIDAATVAKVNHFLLVTSLGTNKIGFPAAILNLFWGVLVWKRKAEEALLASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVMAKNRDLSYCKIVEAIAETTAPLTPMEELLAKIPSQRPYISSPKKPDIAAVSVPDPPANVVTAEPKAATQQETAQPKPVAKQPLSPYTVYDDLKPPSSPSPSQPGGGKQTKISETVPKPSASDTPSSVPGVDGISQTTSSSKVEKPLSPYVAYPDLKPPTSPSPNAPSVSVSTSAAAGVPEIDTISGNGPAQLSTADEPKEEHLPEPKSRPLSPYTMYEDLKPPASPSPSFRNS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01764 526 MobiDBLite consensus disorder prediction 395 437 - -
Pumo11g01764 526 FunFam Protein TIC 62, chloroplastic 79 328 - -
Pumo11g01764 526 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 3 465 IPR044719 -
Pumo11g01764 526 MobiDBLite consensus disorder prediction 54 71 - -
Pumo11g01764 526 CDD SDR_a5 83 296 - -
Pumo11g01764 526 Gene3D - 79 328 - -
Pumo11g01764 526 MobiDBLite consensus disorder prediction 356 370 - -
Pumo11g01764 526 MobiDBLite consensus disorder prediction 333 526 - -
Pumo11g01764 526 Pfam NAD(P)H-binding 87 296 IPR016040 -
Pumo11g01764 526 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 80 269 IPR036291 -
Pumo11g01764 526 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01764 Pumo-Chr11 49227619 49239733 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01764 - - gmx:100779056 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01764 11 49227619 49239733 Pumo11g01764 11 49227619 49239733 ECH