Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01731 ATGGAGGAACGAAGCCTTGCACCAGCAGCAGTTGAGGCAGATGAGAGCAATGGGAGAATATCAATCACAAACGACCACGTTTCAATGCCTCAGGAAAATGGGCTACCTCCTCTGGTGAGTGCACTGAAAGCCGCAGCTGAAAAAAATGTAGCCAGCTTTCACTTTCCTGGACACAACAGAGGGCATGCCGCGCCTGCTTCGTTGACTCGGCTCATTGGAACAAGACCATTTGTTCATGACATGCCTGTGCTTCTAGATCTTGACAACCTCTTTTGTCCCCAGGGTCCCATATTAGAAGCACAGACCGAAGCAGCCAAACTGTTTGGATCGTCGCAGACATGGTTTCTTGTTGGAGGTACTACTTGTGGGATACAGGCTGCCATAATGGCAACCTGTTCTCCAGGGGAATTTCTCATTCTTCCAAGGAATTCTCATATATCAGCTATATCTGCTTTGGTATTATCTGGTGCACTGCCTAAGTACATCATTCCTCACTATCAGAATGATTGGGACATTGCTGCTGGTGTCACTCCATCACAGGTATTGAAAGCCATGCAGGAACTAGAAATGGAAGGGAAAAAAGCAGCAGCAGTCTTCATCACTTCACCCACTTATCATGGTATTTGCAGTAACTTGGACGAGATTTCTGAGTTGTGTCATTCTCGAAAACTTCCTTTGATTGTTGATGAAGCTCATGGTGCACATTTTGGATTTCATTCTCAACTGCCTAACTCAGCCCTCCAGCAAGGGGCTGATCTGGCTGTGCAGTCCACTCACAAAGTTCTATGCTCTTTTACTCAGTCATCTATGCTGCACATGTCAGGAAATATTGTAGATAAGGAAAAAATTTCTAAATGTCTCCGAATTCTTCAAACCACAAGCCCCAGTTTTCTGCTTCTGGCATCCCTAGATGCTGCTAGAGCTCAACTTTGTGAGAGCCCTGAGATTGTATTCAACCAAGCAATTGCGTTAGCCAACGAAGCAAAGTCTGTGCTAAAACAAATCCCTGGTATCTCAGTACTTGAGAATTCAAGCTTTCCTGCCTTTCCTGCAATTGATCCATTGCGTCTCACTGTAGGTTTTTGGAAGCTTGGTTTATCAGGCTGCGAAGCAGATGAAATTTTATACAGAGATTATGGAGTCATCTGTGAACTTGTTGGGAATAGATCTATTACTTATGCACTTAATCTTGGAACTTGTAGGGACCATGTCCAAAGGCTTATATTGGGAATAAAGCATTTGGCTGCAACATATGCTTCCATTCAGAAACCTGAAGAGAGAGTGCTAGCTGGTCATGCACCCTTTGATGATATAATCATGAGTTTGATCCCTAGAGATGCCTTTTTTGCAAGTAAAAGAAAAGTAACAATAAAGGAGAGCATTGGTGAGGTTGCAGGGGAGCTTATATGTTCATACCCGCCTGGCATACCAGTATTGATCCCTGGAGAGGTTATTACCGAAAAAATTGTTGATTATATGCTCCATGTTAGGAGTAAAGGTGGTGATATTAGTGGAGCATCTGATCCCTTGCTTTCTTCAATTGTTGTTTGCGGTCAATCAGCTGGGGAGAAGCACATTTAA 1581 0.4371 MEERSLAPAAVEADESNGRISITNDHVSMPQENGLPPLVSALKAAAEKNVASFHFPGHNRGHAAPASLTRLIGTRPFVHDMPVLLDLDNLFCPQGPILEAQTEAAKLFGSSQTWFLVGGTTCGIQAAIMATCSPGEFLILPRNSHISAISALVLSGALPKYIIPHYQNDWDIAAGVTPSQVLKAMQELEMEGKKAAAVFITSPTYHGICSNLDEISELCHSRKLPLIVDEAHGAHFGFHSQLPNSALQQGADLAVQSTHKVLCSFTQSSMLHMSGNIVDKEKISKCLRILQTTSPSFLLLASLDAARAQLCESPEIVFNQAIALANEAKSVLKQIPGISVLENSSFPAFPAIDPLRLTVGFWKLGLSGCEADEILYRDYGVICELVGNRSITYALNLGTCRDHVQRLILGIKHLAATYASIQKPEERVLAGHAPFDDIIMSLIPRDAFFASKRKVTIKESIGEVAGELICSYPPGIPVLIPGEVITEKIVDYMLHVRSKGGDISGASDPLLSSIVVCGQSAGEKHI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01731 526 Gene3D - 36 315 IPR015421 GO:0003824
Pumo11g01731 526 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 453 498 IPR008286 GO:0003824
Pumo11g01731 526 Gene3D - 417 520 - -
Pumo11g01731 526 PANTHER ARGININE DECARBOXYLASE 18 517 - -
Pumo11g01731 526 MobiDBLite consensus disorder prediction 1 33 - -
Pumo11g01731 526 SUPERFAMILY Ornithine decarboxylase C-terminal domain 374 518 IPR036633 GO:0003824
Pumo11g01731 526 CDD Orn_deC_like 37 329 IPR000310 GO:0003824
Pumo11g01731 526 Pfam Orn/Lys/Arg decarboxylase, major domain 36 335 IPR000310 GO:0003824
Pumo11g01731 526 SUPERFAMILY PLP-dependent transferases 36 414 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01731 Pumo-Chr11 48912951 48920343 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01731 - - gmx:100819143 892.108