Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01723 ATGGCCGTCAACGACGCCGATCAATCCAATAGGGCTCACAGGACTCGTCAATCCGGTGCCAAATCCAACAAGAAGAAGACTAAGAAGAAGCAGAAGCAGAATCCCGATGGCCTAGAGGATCCCAAAAAGCAAAACCCTAAGGCATTCGCCTTTACTTCCTCCAACAAAGCCAAGCGCTTGCAATCACGCGCCGTCGAGAAAGAGCAGCGCCGCCTTCATGTTCCAGTCATCGACCGCTCGTACGGCGAGCCCGCTCCATACGTCGTCGTCGTGCAGGGTCCTCCTCAGGTGGGGAAGTCACTGTTGATTAAGTCTTTGGTTAAGCATTACACGAAGCATAATTTGCCTGATGTTCGAGGTCCAATTACTATCGTGTCAGGGAAGCAAAGGCGGGTGCAGTTTGTGGAATGTCCGAATGATATCAATGGCATGATAGATGCTGCCAAGTTTGCAGATCTAGCACTTCTTCTTATAGATGGGAGTTATGGTTTTGAAATGGAAACTTTTGAGTTCCTTAATATATTGCAAGTTCATGGGTTCCCGAAGGTCATGGGGGTTCTCACCCATCTTGATAAATTCAAGGATGCGAAAAAGTTGAGGAAAACAAAACAGCGACTCAAACATCGGTTTTGGACTGAAATATATGATGGTGCTAAACTATTTTATTTATCAGGCCTTATTCATGGAAAGTATGTCAAGCGTGAAGTTCACAATCTTGCTCGATTTATTTCAGTCATGAAATTTCATCCTTTATCTTGGCGAACTTCCCACCCCTATGTTATGGTAGATCGTTTTGAAGACATCACTCCTCCTGAAAAAGTGCATGAAAATAATAAATGTGACAGAAAAGTCACCCTTTATGGGTATCTTAGAGGCTGTAATTTGAAAAAGGGCAGTAAGGTGCACATAGCAGGAGTGGGTGATTATAGTTTAGCTGGTATTACTGCTTTACCTGATCCTTGTCCTCTTCCATCTGCTGCAAAAAAGAAAGGACTGCGTGATAAGGAAAAATTATTCTATGCTCCCATGTCTGGCCTTGGGGATCTTTTGTATGACAAAGATGCTGTATACATAAATATTAATGACCACCTTGTTCAATTCTCAAAAGTTGATGATGAAAACTCTGCTATGACAAGCAAAGGAAAGGACAGAGATGTTGGGGAGGTTTTGGTGAAATCGCTACAGAATACCAAATACTCAATCAATGAAAAACTAGAGAACAGCTTTATCAATATTTTTGGTCAAAAGGCAAATGTGTTGTCAGAAGCTCTAGGTGATGCACATGGCACAAACAAGGATGTTGAACAGAATGACAAAACAGAAGATAATAACAAAATGGATTTGGATGGTTCAGAATCATCTGATCAGGATGAAGATGATGCCACAGACACCGAAGCCTCTGGCACTGATGATGAAGACAAAGATAAACCAAATAGTAATGCTAGGAATGGAGTCCACTTGCAAGAACATATTGAGTTTCATGATGGAAGACGAAGGAGAAGAGCAATATTTGGAAATGATGTTGATCAAAATGATCTGATGGATTCAGAAGGAGATGAGGATGGTTCTACCAGTGGTGATGATGTAGAATCTTCTGATTCAGAATATTCAGAAGAAGAGGAGGAAGATGACAATGATAATGATGACACAAATGAAGATGACATGGGTAATGTTTCTAAGTGGAAAGAGTCTTTGGCAGAAAGAACTCTCTCGCGGAAAACTCCTAGTTTGATGCAACTTGTGTATGGGGAATCTACTATTAATTCAACCACTATAAACAGAGAGAATGATAATAGTGGGGACGAGGAAAGTGATGATGACTTTTTTAAGCCCATAGAAGAAGTGAAAAAGCAAAACATGAGAGATGGATTGAATGATGATGGGATGGTCAACACTGAGGATTGTTCCAAGTGTACACAATTTGTGGATCAGAGATGGGATGAGAAAGATAATGAGGAGATTCGCAACCGATTTGTGTCTGGCAATTTGGCAAAAGCTGCACTTAGAGATGGGATTAGAAATGCTTTACCAGCAGCTAATACTGAAGAGGAAAATGATGATGTCTATGGTGACTTTGAAGATTTGGAAACAGGAGAAAAGCATGGGAATCATCAGACAGATGATGCTTTTGCTGCAACAACACACAAGGGAGATGATTTAGAAGCTGAGGAGCGGAGGCTTAAGAAACTTGCTCTTCGTGCTAAATTTGATTCTCAATTTGATGATGACTCTGGGTCACCTGAGGAAGATACTGGTAATGAAAATGAAGGCAAGTTCCGTCGTGGTCAAGCTAATGAAAGTAGCTATTTTGACAAGTTGAAAGAGGAGATTGAAGTCCAGAAACAAATGAATATAGCTGAACTCAATGATCTTGATGAGGCTACCCGATTGGAGATAGAAGGCTTCCGAACAGGAACATACCTAAGATTGGAGATTCATGATGTTCCTTGTGAGATGGTTGAATACTTTGATCCCTACCATCCAATATTGGTTGGAGGGATTGGTATAGGGGAGGAAAATGTTGGATACATGCAGGCCAGGTTAAAGCGGCACAGGTGGCACAAGAAAGTTTTGAAGACTAGAGACCCAATTATTGTATCTGTTGGATGGAGGCGTTACCAGACAACCCCAGTTTATGCCATTGAGGATAGCAATGGAAGGCATCGTATGCTAAAATATACTCCAGAACACATGCATTGCCTTGCTATGTTTTGGGGCCCTCTTGCTCCTCCCAACACTGGGGTTGTAGCCATTCAGAATTTATCAAATAATCAGGCAACATTTAGGATTACTGCAACTGCAGTTGTACTTGAGTTTAATCATGCAGCAAGGATAGTGAAGAAAATCAAATTGGTTGGTTATCCATGCAAAATATTCAAGAAGACAGCACTTATCAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGGTTTGAAGGTGCAGCTATTCGGACAGTCAGTGGGATCAGGGGGCAGGTCAAGAAGGCTGCAAAAGAAGAGATAGGTAATCAACCAAAAAGAAAGGGTGGGCAAACCAAAGAAGGAATTGCTAGGTGCACCTTTGAAGACAAAATTCTGATGAGTGACATTGTTTTCCTGCGTGCATGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCATTGACAACAACATTGCAGCCTCGTGACAAGACCTGGAAAGGAATGAGAACTGTCGCAGAATTGAGAAGAGAACACAATCTTCCCATTCCTGTAAATAAAGATTCACTTTACAAGAAAATTGAAAGAAAACCTAGAAAGTTCAATCCATTGGTGATTCCCAAGTCTCTACAAGCGGGTCTTCCCTTTGCATCAAAACCCAAGGATATATCCAAGCGAAAAAAGCCGTTACTTGAAGAGAGAAGGGGAAGGGGTGTTGTCATGGAACCTCGAGAGCGCAAAGTTCATGCTCTCGTTCAACACCTCCAGTTAATAAATAGTGAGAAGATGAAAAAGCGAAAGCTTAAGGAAGAGAATAAGAGGAAAGCACTTGAAGCAGAGAGAGCAAAAGAAGAGCAGTTGTCGAGAAAGCGCCAGAGAGAGGAGAGACGAGACAAATACCGGAAGGAAGACAAGCAGAATAAGAAACTTCGGAGAGCAGAGGTTTGA 3627 0.4163 MAVNDADQSNRAHRTRQSGAKSNKKKTKKKQKQNPDGLEDPKKQNPKAFAFTSSNKAKRLQSRAVEKEQRRLHVPVIDRSYGEPAPYVVVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVMVDRFEDITPPEKVHENNKCDRKVTLYGYLRGCNLKKGSKVHIAGVGDYSLAGITALPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHLVQFSKVDDENSAMTSKGKDRDVGEVLVKSLQNTKYSINEKLENSFINIFGQKANVLSEALGDAHGTNKDVEQNDKTEDNNKMDLDGSESSDQDEDDATDTEASGTDDEDKDKPNSNARNGVHLQEHIEFHDGRRRRRAIFGNDVDQNDLMDSEGDEDGSTSGDDVESSDSEYSEEEEEDDNDNDDTNEDDMGNVSKWKESLAERTLSRKTPSLMQLVYGESTINSTTINRENDNSGDEESDDDFFKPIEEVKKQNMRDGLNDDGMVNTEDCSKCTQFVDQRWDEKDNEEIRNRFVSGNLAKAALRDGIRNALPAANTEEENDDVYGDFEDLETGEKHGNHQTDDAFAATTHKGDDLEAEERRLKKLALRAKFDSQFDDDSGSPEEDTGNENEGKFRRGQANESSYFDKLKEEIEVQKQMNIAELNDLDEATRLEIEGFRTGTYLRLEIHDVPCEMVEYFDPYHPILVGGIGIGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDSNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGVVAIQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQPKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTTLQPRDKTWKGMRTVAELRREHNLPIPVNKDSLYKKIERKPRKFNPLVIPKSLQAGLPFASKPKDISKRKKPLLEERRGRGVVMEPRERKVHALVQHLQLINSEKMKKRKLKEENKRKALEAERAKEEQLSRKRQREERRDKYRKEDKQNKKLRRAEV 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 570 595 - -
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 17 31 - -
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 738 765 - -
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 1155 1208 - -
Pumo11g01723 1208 SMART DUF663_2 711 1039 IPR007034 -
Pumo11g01723 1208 Pfam AARP2CN (NUC121) domain 235 320 IPR012948 GO:0005634|GO:0042254
Pumo11g01723 1208 Gene3D - 87 249 IPR027417 -
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 487 506 - -
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 427 610 - -
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 452 468 - -
Pumo11g01723 1208 CDD BMS1 48 277 IPR037875 GO:0005525
Pumo11g01723 1208 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 719 1040 IPR007034 -
Pumo11g01723 1208 PANTHER RIBOSOME BIOGENESIS PROTEIN 6 526 IPR039761 GO:0042254
Pumo11g01723 1208 SMART aarp2cn2 235 321 IPR012948 GO:0005634|GO:0042254
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 428 451 - -
Pumo11g01723 1208 FunFam BMS1 ribosome biogenesis factor 87 249 - -
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 751 765 - -
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 1 68 - -
Pumo11g01723 1208 Coils Coil 1144 1206 - -
Pumo11g01723 1208 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 85 249 IPR030387 -
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 553 569 - -
Pumo11g01723 1208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 223 IPR027417 -
Pumo11g01723 1208 MobiDBLite consensus disorder prediction 512 552 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01723 K14569 - gmx:100792176 2077.37