Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01716 ATGGCCATCCCCAAAGGCACCACCCATGGCCTAGCATCTATTATTGTGATCATAGCATTAATTCTCCCCAAAACTGCAGCACAAGCAATCTCCCCCAATGGTTCTGTTGCAAATTTTAAATGTTCTGATAAGAGCACATTATTTGAAACAGATAATGTGTCAAAACCCATTAAGCCGGACAAAACTATCAGAGTAGATCCATTAGATAATTTCAAAAAATACAGAGGAGGATTTGACATCACCAATAAGCATTATTGGAGTTCAGTTTTCTTCACAGGAGTATATGGATATGCAATCGGGGTGCTTTGGCTTTTGTGTGGAATGGTGTGTGGATTCTTTTGGTTAACAATCAAATTTTGTTGCCAAAGTGATGGAGGAAGAAGGACCAAGGAAATTCTTCCTTGTAATTATAAGAGTTGTGATTTTTCGCCAATTCCTCTGGCTATATCATTCGTGATATTAATTTTGGTTGCTAGTGTGTTAGTTTATGTTGGGAGTGCAAAATTCCATTATCAAGCAAGGACTTCAGTTAATGTTATAATCAAGATAGCAGATGACGCATCAGAAATCATACACAATGCAACAAGAGCGTTAGAAGAAATCCAAGAAGACTTGGTGGAATCCGGTATTAGTCCTGAGGTTTCTGGAAAACTTAACTCTACTGCTACAAAAATGGATAATGTTGTTGATAATATCGTGAAGAAAACAAGGAAAAATAGGCGCACTGTTAACAGGGCTTTCAAATTTATTTTCATCCATGATTTTTTGTTTTTTTTTTTTCTCTCTTTTTTTCTCAGGTTTGTTATACTGTGCTGGTTGATGACGGTGATATGCTGGCTAATCTTTGGATTGTATTTCTTCTTAGAAAATTTTTCTAATGATATGTGCACAGTTCTTTGCAACTTCGAAGAAAATCCCTATAATAACAGCCTAACCTCCATCCTCCCTTGTGATGAATTGCGCTCAGCAAAATCAATTCTCCATGAAGCTGGTGCAGGGATCTCCATCCTCATCAATGAGGTGAATTCAAACTTGGGGTCTTTGTTTCCAAATCATGTTTATCTGTGCAATCCTTTCTCAGCACCACCTAAATATTCATATCAGCCAGAGTTTTGCCCACCTAATAGTATTCAAATAGGGGATATCCCCAAGGTATTGAAGCCTTATACCTGTTTTGGTGATAGTGATGAAAAATGTGGCAGTGATGATTTCATGAATGGAGGTGAATATAAGGTAGTTGAGTCTTACACAAGTTCAATTCAGAACCTACTGAATATGTATCCTAGTATGGAAAACTTGATAGGTTGCCAGCTGGTAAAAGATGCATTCTCTCAAGTCCTTCTCAAACACTGCAAGCCTTTGAACAAATTTGCTAAGATGGCATGGGTAGCAATGGTGTTTCTTGCAGTGATGATGGTGTTCTATGTTGTGCTATGGACAATAAAGGCTTGTCAAAAGCGTAGTTATCATCCTTCAGATGGTTTTGTGTAA 1491 0.3763 MAIPKGTTHGLASIIVIIALILPKTAAQAISPNGSVANFKCSDKSTLFETDNVSKPIKPDKTIRVDPLDNFKKYRGGFDITNKHYWSSVFFTGVYGYAIGVLWLLCGMVCGFFWLTIKFCCQSDGGRRTKEILPCNYKSCDFSPIPLAISFVILILVASVLVYVGSAKFHYQARTSVNVIIKIADDASEIIHNATRALEEIQEDLVESGISPEVSGKLNSTATKMDNVVDNIVKKTRKNRRTVNRAFKFIFIHDFLFFFFLSFFLRFVILCWLMTVICWLIFGLYFFLENFSNDMCTVLCNFEENPYNNSLTSILPCDELRSAKSILHEAGAGISILINEVNSNLGSLFPNHVYLCNPFSAPPKYSYQPEFCPPNSIQIGDIPKVLKPYTCFGDSDEKCGSDDFMNGGEYKVVESYTSSIQNLLNMYPSMENLIGCQLVKDAFSQVLLKHCKPLNKFAKMAWVAMVFLAVMMVFYVVLWTIKACQKRSYHPSDGFV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01716 496 Coils Coil 184 204 - -
Pumo11g01716 496 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 39 487 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01716 Pumo-Chr11 48814792 48819392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01716 - - pvu:PHAVU_011G052700g 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04103 4 81716384 81722332 Pumo11g01716 11 48814792 48819392 PCT