Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01715 ATGCCTCGTTACAAAGACGAGTCTCCTGCAGTTCGGGTCTACACTGTCTGTGATGAATCCAGATATTTGATTGTGAGGAACGTTCCAGAATTAGGTTGTGGGGATGAGTTGCTGCAACTGTTTTCATCCTATGGAGAAGTCGAGGAGTGTAAGCCAATGGATGCAGAGGACTGTGAGAAATACACCGATGTATTTTGGATCAAATTCCGCCTTGTCAGCAATGCCAGGTTTGCAAAAAGAAAATTGGACGATTTTGTTTTCTTTGGGAATAAACTGCAGGTCTCATATGCTCCTCAATTCGAGAGCCTGTCGGATACAATGGATAAATTAGAGGGAAGAAGAAGGGAGGTTTTAGCACGATTGAACCCTAGAAGATCTAAAGAGACCACAGCCTCAAGCTCTAAGCCTCTGATTACATCAAAGACCAATTGCACACAACATTTAGATTCTAGTGCAAGGGATGTAGAATTCAAAGGAGGTTCACACAGTGGTAATTTTCCAATAAGAATGGTCTCCTCTAATGAGGATTATTTTGCTTCACATTCCATGAATCAAACAGTGAGTCTTGTGCGAGATAAGCTTGATAAGATTAAATCAAGTGGTGAGCATATACAAGCTGGATCTGCATCAAAGAAACAACGAGTTGATAATAGGAGGAGAATTTAA 666 0.4099 MPRYKDESPAVRVYTVCDESRYLIVRNVPELGCGDELLQLFSSYGEVEECKPMDAEDCEKYTDVFWIKFRLVSNARFAKRKLDDFVFFGNKLQVSYAPQFESLSDTMDKLEGRRREVLARLNPRRSKETTASSSKPLITSKTNCTQHLDSSARDVEFKGGSHSGNFPIRMVSSNEDYFASHSMNQTVSLVRDKLDKIKSSGEHIQAGSASKKQRVDNRRRI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01715 221 PANTHER UNCHARACTERIZED 3 221 IPR039599 -
Pumo11g01715 221 MobiDBLite consensus disorder prediction 125 142 - -
Pumo11g01715 221 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 92 IPR000504 GO:0003723
Pumo11g01715 221 SUPERFAMILY RNA-binding domain, RBD 8 102 IPR035979 GO:0003676
Pumo11g01715 221 MobiDBLite consensus disorder prediction 122 142 - -
Pumo11g01715 221 MobiDBLite consensus disorder prediction 200 221 - -
Pumo11g01715 221 CDD RRM_RBM48 11 110 IPR034264 -
Pumo11g01715 221 FunFam RNA-binding protein 48 isoform X4 16 117 - -
Pumo11g01715 221 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 99 IPR000504 GO:0003723
Pumo11g01715 221 Gene3D - 16 112 IPR012677 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01715 K24824 - gmx:100527829 423.32