Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01708 ATGAGTGATACGAAGGAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGGAAAGGTCTTCTATATGGATTTATGCGATTATTTTCAATACCACTAAAAACATTGCGTGGAGCTAGTCGGTCATTGAGAGTAGATCAATTTTGCAGTGTAGTGAATCTATCTTCATCATTGCAGATAGAATTGGTTCCATGCCTTAGGGACAATTATGCATATCTTTTACATGATGTGGACACGGGGACTGTTGGTGTTGTTGATCCTTCTGAAGCTGCACCTATCATAGATGCGTTGAGCAAGAAAGATCTAAATTTGACATACATACTGAACACCCACCACCATCCTGATAACACTGGTGGAAATGCAGAGTTGAAAGAAAGGTATGGGGCAAAGGTAATTGGTTCAGAAATTGACAAGGAAAGAATTCCTGGTATTGATATCTATTTGAGTGATGGAGATAACTGGATGTTCGCAGGCCATGAGGTGCATATATTGGCCACACCTGGTCACACCGAAGCAGGTCATGTAAGCTTCTACTTTCCGGGTTCTGGGGCAATTTTTACCGGAGACACCTTGTTCAGCTTATCATGTGGCAAGCTCTTGGAAGGAACCCCCGAACAGATGCTATCTTCTCTTAAAAAGATCATGTCTTTGCCAGATGATACAAGTATTTATTGTGGTCATGAATATACCTCGAGTAATTCAAAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAATCCTATGCTGCCCATGTAGCTAACCTTAGAAATAAGGGCTTGCCCACGATTCCAACTACGCTGAAAATGGAAAAGGCTTGCAATCCATTCCTTCGCACATGGAGCACTGAAATCCGACAAAAACTAAATATTGCATCCACAGCAGATGATGCAGAAGCCCTGGGTGTTATTCGGCTAGCAAAGGATAATTTTTAG 951 0.4185 MSDTKERSGFCVWPDARQLCLRKGLLYGFMRLFSIPLKTLRGASRSLRVDQFCSVVNLSSSLQIELVPCLRDNYAYLLHDVDTGTVGVVDPSEAAPIIDALSKKDLNLTYILNTHHHPDNTGGNAELKERYGAKVIGSEIDKERIPGIDIYLSDGDNWMFAGHEVHILATPGHTEAGHVSFYFPGSGAIFTGDTLFSLSCGKLLEGTPEQMLSSLKKIMSLPDDTSIYCGHEYTSSNSKFALSIEPENKELQSYAAHVANLRNKGLPTIPTTLKMEKACNPFLRTWSTEIRQKLNIASTADDAEALGVIRLAKDNF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01708 316 SMART Lactamase_B_5a 72 231 IPR001279 -
Pumo11g01708 316 PIRSF Glx 57 316 IPR017782 GO:0004416|GO:0019243
Pumo11g01708 316 Hamap Hydroxyacylglutathione hydrolase [gloB]. 62 316 IPR017782 GO:0004416|GO:0019243
Pumo11g01708 316 Gene3D - 62 316 IPR036866 -
Pumo11g01708 316 Pfam Metallo-beta-lactamase superfamily 76 231 IPR001279 -
Pumo11g01708 316 SUPERFAMILY Metallo-hydrolase/oxidoreductase 62 314 IPR036866 -
Pumo11g01708 316 PANTHER BETA LACTAMASE DOMAIN 56 316 - -
Pumo11g01708 316 CDD hydroxyacylglutathione_hydrolase_MBL-fold 67 231 IPR035680 -
Pumo11g01708 316 FunFam Hydroxyacylglutathione hydrolase, mitochondrial 62 316 - -
Pumo11g01708 316 Pfam Hydroxyacylglutathione hydrolase C-terminus 232 316 IPR032282 -
Pumo11g01708 316 NCBIfam hydroxyacylglutathione hydrolase 65 316 IPR017782 GO:0004416|GO:0019243
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01708 Pumo-Chr11 48715657 48720011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01708 K01069 - gmx:100805615 604.749