Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01705 ATGGGGTTGGAATCGGTGGGAGATTTAGCGATTAACCTAATTCTGAAAAAGTTAGGAGCCGAAGACATTGCGAGAGTGGCGTGTGTGGGCAAAAGGTTCAGTTCTTCCGCTTCCGACGACACTCTTTGGATCAATCTCTGCTTCCACGAACTCGCTTTGACCCAACCCATCGATCATCTCGGAAACCCTCTCCCATCTTTCAAGGAATGTTATCAAGCATGGAGAGGAGCTTTTGTTATGTATCCTTGGTCTCTTGTTAAGCGTGTAAAAAGGTGCTGGGATAGAATAAAAACCTGGTTGACCAATAATTTTCCTGAAGCTGAAGCCACTCTTTGTAAAGGTGCAACTGAAGCTGACATTCAGGAGTTGGAGAATGTATTAAAGGTGAAATTGCCACTTCCTACAAGGATCCTTTATCGTTTTCACAATGGGCAAGAAATTGCAAAAGCAGATCCAGAAACTAGTACGTTTGGCAGTTCTTTGGGTCTAATTGGTGGCTACTCCTTCTATAGTCATTTGGTGAATGTTTATCTATTACCTATACGTCAGATAATCCTAGAAACTCAGCAAATTAGGCGTCGCTTGAGCTTTTTAAGAAAATCAAAGTATGTTCTCGTGGCTGCTTCGTCCACATACAGTAGAAAGTTATTTTTCCTCAACTGTACCAATGGTCAACTATATGTTGGGACCAGGGATCTTACTGAAAGAGACATAATCCCTTGTGTACCTCATGATCTGATTAGTTTACATCAGGAATTGAATAGTTCAGAGCAACAAGATGCCATGCTACTGTGGTTAGAAGAACATGGTCGCCGTTTAGAACATGGCTTTATCAAACTTCGTGATGAAGGAAATGGAAAAAGCATTAATCTTTTCCCAGAAGAATCGCCTCTTTGTTCAACGGCTGTTACTAATGGTGTGAAGGTTCGTGCTTCTGCATTGGTTATCCCTGAGTTGATTGATCTTCAAGATGACCTTGAAAAGTACTTATTTGCTTATTCAATCCGCTTGTCCCTTGAACCTCAAGGATGCGTGATTAATGGAATGTCCTTCAGCTCTTGCCAGCTCCATTGGAGGCACTGGATCATCCGTGCTAATGATATTGTTGTATCTGATGTCGATGGAGAAGCTGTTATAGGACAGTTTCCACTTTTGCGTCCAGGTGCTCAAGAATTTGTTTATCAGAGTTGCACGCCTCTACCAACACCATCAGGTTCCATTGAAGGTTCTTTTTCATTTATACCTGGCAGATTGGCAGACCCAAAAGGAGACTCTTTTGATGCTACAGTGGCTCGTTTCCCGCTCCAGCTGCCTGACTATATATTCTGA 1329 0.4236 MGLESVGDLAINLILKKLGAEDIARVACVGKRFSSSASDDTLWINLCFHELALTQPIDHLGNPLPSFKECYQAWRGAFVMYPWSLVKRVKRCWDRIKTWLTNNFPEAEATLCKGATEADIQELENVLKVKLPLPTRILYRFHNGQEIAKADPETSTFGSSLGLIGGYSFYSHLVNVYLLPIRQIILETQQIRRRLSFLRKSKYVLVAASSTYSRKLFFLNCTNGQLYVGTRDLTERDIIPCVPHDLISLHQELNSSEQQDAMLLWLEEHGRRLEHGFIKLRDEGNGKSINLFPEESPLCSTAVTNGVKVRASALVIPELIDLQDDLEKYLFAYSIRLSLEPQGCVINGMSFSSCQLHWRHWIIRANDIVVSDVDGEAVIGQFPLLRPGAQEFVYQSCTPLPTPSGSIEGSFSFIPGRLADPKGDSFDATVARFPLQLPDYIF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01705 442 SUPERFAMILY SMI1/KNR4-like 92 197 IPR037883 -
Pumo11g01705 442 Pfam SMI1 / KNR4 family (SUKH-1) 114 171 IPR018958 -
Pumo11g01705 442 Pfam ApaG domain 324 414 IPR007474 -
Pumo11g01705 442 Gene3D ApaG domain 298 442 IPR036767 -
Pumo11g01705 442 PANTHER F-BOX PROTEIN SKIP16 1 442 - -
Pumo11g01705 442 SUPERFAMILY ApaG-like 303 442 IPR036767 -
Pumo11g01705 442 ProSiteProfiles ApaG domain profile. 301 442 IPR007474 -
Pumo11g01705 442 SUPERFAMILY F-box domain 13 72 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01705 K10290 - gmx:100809876 841.647