Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01697 ATGTGTATGTGTTCTCCATTCAGGCACTGTGTCTCGCTAGGAGAGCAAGGTTATTATTGGAGGGGTTTAAGAAATTTGAGCTATGGCAGGGTGAACCTTGTGATAACGGGAGGGAAGACCAAGTTTGAGACTCATGAGGAAGAGCCTCCGAAGAAGGACAAGTGGAAGACCAAGAAGAGGTTGAAGATGCAGAGAAAGAGAGAGAAAGAGAAGAGGAAAGCGGCCAACAGGAAGGACCCCCGCCGACTTGGTGTCAAAGGGAAGAAGAAGAAGCAGAGATTTGCCAGTGCAGAAGAGAGAATCAAGTACAAGATTGAAAAAGCCAGAATTAAGGAAGCATTGCTCATTGAAAGGCTCAAAAGATATGAAGTTCCTAAAGCTCAGGGTCCTGTTGTAAAGCCTGATGACTTGAGGGGGGAGGAACGGTTTTATTTGAAGAAAATGGCTCAGAAGAGATCTAATTATCTACAAATTGGCAGAAGAGGATTATTTGGAGGGGTTGTTCTCAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAACCTGGTCAAGTACATGAGTATGCACAAGAACTTGCCAGATTGAGTGGTGGTATTCCACTTCAAATAATTGGAGATGACACTATAATATTTTATCGCGGAAAGAACTATGAACAGCCTGAGGTTATGTCACCAATTGATACCCTGTCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCACTTGAGTCAGTGAGGCGCTTCATTGCTATTGCTGAGAAAGAATTAGAGCTATATTACAGGCACGTTGCACTTTATGGTGATCCAAACAACCGAAATCCCTTATCAATGCTAGAAGATCCAAGTGGAAACTCCAAGGAAAAAGGGAATCATGGAATTAGTGATGATTTTTCAGCCAGTCTTTCAGAGACTGAAGCAGATTCCACGGAAATGGAGCTATCAGAAACAGAAGATAGTTTTGAAGATGAAAACATGTCAATGAATGAATCAGATTCTGAAGAGGACAGCATTGTGGATTCCAACGGTGATAAAGAAAGAGAGGTATATTTTACTAAAATGCAAGATGAAAGTGTAAGCTCGACCTCAGGTTCTTCATCAATGTCTAAACATAGCCACTATTATAATAATCAATATTTATAA 1170 0.4068 MCMCSPFRHCVSLGEQGYYWRGLRNLSYGRVNLVITGGKTKFETHEEEPPKKDKWKTKKRLKMQRKREKEKRKAANRKDPRRLGVKGKKKKQRFASAEERIKYKIEKARIKEALLIERLKRYEVPKAQGPVVKPDDLRGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPLQIIGDDTIIFYRGKNYEQPEVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNNRNPLSMLEDPSGNSKEKGNHGISDDFSASLSETEADSTEMELSETEDSFEDENMSMNESDSEEDSIVDSNGDKEREVYFTKMQDESVSSTSGSSSMSKHSHYYNNQYL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01697 389 SMART CRS1_YhbY_2 137 221 IPR001890 GO:0003723
Pumo11g01697 389 Gene3D - 137 235 IPR035920 -
Pumo11g01697 389 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 27 382 IPR040286 -
Pumo11g01697 389 MobiDBLite consensus disorder prediction 318 346 - -
Pumo11g01697 389 MobiDBLite consensus disorder prediction 363 389 - -
Pumo11g01697 389 MobiDBLite consensus disorder prediction 280 389 - -
Pumo11g01697 389 SUPERFAMILY YhbY-like 137 231 IPR035920 -
Pumo11g01697 389 MobiDBLite consensus disorder prediction 55 72 - -
Pumo11g01697 389 ProSiteProfiles CRM domain profile. 135 232 IPR001890 GO:0003723
Pumo11g01697 389 MobiDBLite consensus disorder prediction 42 92 - -
Pumo11g01697 389 Pfam CRS1 / YhbY (CRM) domain 138 221 IPR001890 GO:0003723
Pumo11g01697 389 MobiDBLite consensus disorder prediction 347 362 - -
Pumo11g01697 389 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01697 Pumo-Chr11 48633597 48637537 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01697 - - gmx:100796393 649.047