Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01673 ATGGAGAAGTACTTGGTTTCGCATAAACCCTCAATTGAAAAGGTTCGGCCTCTTCGAAGGTGTCAATGGAAGAGGAGCTCGGTTGAACTAAATGGGAGATTTGAGCGTAATTATCGTCATGAGATGCTGGATCTGCTAATTCGTTCGTATTCTGAGGTTGCAGCGTTTCCGCATTTGTATCAAGTGGATGGGTCGCCGTGTCAATCTCATACGAATCGATTGATTGGTGAGGCAAATGGTGATGGCCATCTTCCATTTAGAAAGCAAGGCATCTCTGCAGTAGATTTTGACAACAAGGGAATATACTTGGTGTCTGTGACAAAATCAGGTTGCTTAACAGTTCACGACTTTGAAGCTCTTTATTGCCAGATACCTGAATTAACTTGCTTGAAAGAAGATGAAAAGAAGCATTTAATGCACCTCTCACTAAATCGACAACTTGATGCTGTCAGATGGAATCCTCTTAATCAGGATGAGGTTGTTTGTGCATCTGTAAAAAGTAATGAACTACTCATATTCGATGTTGGATATGTCTCATCAGATCCAGTTGAAGTGTTAAGAACAAGACAAACAACCACAGTTAATGGATCCAGCATACACAAAGGTCTCTCTGATGTAGCTTTTACGAAAAATGACACAAGGATACTTGCTTCTGATACACATGGTGCAATTAATGTCTGGGATAGAAGAGTGAATGCTCTACCTTGCCTTGAGCTTGCATCTGCTTCATGCGGTACGCTTAACAGCATCCAATTAAATGCAGATAATCAGATTATTTTTGGTGCTGGGAAACATGGGCTTGTGTACGTATGGGATATTCGTGGTGGAAGAGCATCTGCTACTTTTCAAAGTCTCAAAGAGATATGCCATCCACCTGTAACATCAGTGAAGTTGGCAACATTGCTAGAGAAGATTGGATCTTTGAAGGCACAGGCAAATATTGTTCCCAAGGAGATTCACTCTATTGATATTAATCCATCATGCCCATATCAGTTAGCTTTCCATCTTGTCGATGGCTGGTCAGGCGTTTTGGATATTAATAATCTTCAAGTTACGCATATTCATTGCCCACCCCCAGCTTGGTTAAACGATTCCTATATTCCCGCTGATCTATCATATTTAAGAAAACCTTCATGGTTATCGACGGGTTCGGTAAGAAATTTTATTGATATAATGCACCTACTTTATTTTTACACACGATTCCCTACAAAACTTTTACCTCTAGTCATATCGGCAAGCAGCAAGCTACTAATTATCATCAGTTTCTTTAGTGCTTGTTACAAGTCTGATGGTAGTTCGCGTGTTTAG 1308 0.4029 MEKYLVSHKPSIEKVRPLRRCQWKRSSVELNGRFERNYRHEMLDLLIRSYSEVAAFPHLYQVDGSPCQSHTNRLIGEANGDGHLPFRKQGISAVDFDNKGIYLVSVTKSGCLTVHDFEALYCQIPELTCLKEDEKKHLMHLSLNRQLDAVRWNPLNQDEVVCASVKSNELLIFDVGYVSSDPVEVLRTRQTTTVNGSSIHKGLSDVAFTKNDTRILASDTHGAINVWDRRVNALPCLELASASCGTLNSIQLNADNQIIFGAGKHGLVYVWDIRGGRASATFQSLKEICHPPVTSVKLATLLEKIGSLKAQANIVPKEIHSIDINPSCPYQLAFHLVDGWSGVLDINNLQVTHIHCPPPAWLNDSYIPADLSYLRKPSWLSTGSVRNFIDIMHLLYFYTRFPTKLLPLVISASSKLLIIISFFSACYKSDGSSRV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01673 435 SMART WD40_4 232 272 IPR001680 GO:0005515
Pumo11g01673 435 SMART WD40_4 187 228 IPR001680 GO:0005515
Pumo11g01673 435 SMART WD40_4 71 116 IPR001680 GO:0005515
Pumo11g01673 435 Gene3D - 69 397 IPR015943 GO:0005515
Pumo11g01673 435 ProSiteProfiles Trp-Asp (WD) repeats profile. 240 281 IPR001680 GO:0005515
Pumo11g01673 435 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 87 385 - -
Pumo11g01673 435 SUPERFAMILY WD40 repeat-like 86 394 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01673 Pumo-Chr11 48110964 48118587 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01673 - - gmx:100780441 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01673 11 48110964 48118587 Pumo11g01673 11 48110964 48118587 ECH