Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01647 ATGGCACGCGCTCTAACACTAGCACCCATCTCTTACACTCTTGCTAAAACCCTAAACCCCATTTTCCCATTCCACAACACCCTTCCATTCTCCTCTTCAATCCTTTCTCGCCCAAAGCTCACTCGCCGGAGCCTATCCCGCTCCGTCCTCCGGTCTACCGCCGGCGAATTTTCCGGCAGTGTCGACGACAACGACGAAGCATCGGAGGACTTGGACGAGCTCGATGTCGTCGCCCTCGAGCAAGAAGCGAAGGACGCTGTCGAAGCGTATTCATGCTCTCTGTCTCAAATTTTGAGCATTGAAGACCAGGAGAAAAATGATCGCAAGGAAACAGCTCAATCCCGCAGGAGGACTCCACGTAGAACAAAAATTATCCCTGACAATCTTCTCCCAAGGATTGCAATTGTTGGAAGGCCAAATGTTGGCAAATCAGCATTATTTAATCGTCTTGTCGGGGGAAACAGGGCAATCGTGGTGGATGAACCTGGGGTTACCAGGGATCGATTATATGGTCGATCATATTGGGGAGAACATGAATTCATGGTAGTGGACACAGGTGGGGTTATCACCGTTTCAAAATCACAAGCTACTGTCATGGAAGAGCTGGCTATTACTACTACCATTGGTATGGATGGCATTCCACTTGCTGTTAGAGAGGCAGCTGTTGCCAGGATGCCCTCAATGATCGAGAGACAAGCAACTGCAGCTGTGGAAGAATCATCTGTGATTATTTTCCTAGTTGATGGTCAGGCAGGTCTAACAGCTGCTGATGAGGAGATTGCTGATTGGCTACGTAAAAACTACTCAGATAAATATGTCATTCTTGCAGTTAACAAGTGTGAATCTCCACGCAAAAGAATTATGCAGGCGTCTGAATTTTGGTCCCTTGGATTTGAACCACTTCCAATATCAGCTATCTCAGGGACTGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCTGGGCTACAGAAAATTGAGGAATCTAATAATCTTGTTGAAGAAGAAGATTATGTTCCGGCAATTTCAATTGTTGGTAGACCAAATGTTGGCAAAAGTAGCATTTTGAATGCACTGGTTGGTGAGGACAGAACAATAGTCAGCCCCATCAGTGGCACTACCCGTGATGCTATTGATACTGAATTTACTGGACCAGATGGACAGAAGTTCCAACTTATTGATACTGCCGGAATCAGGAAAAGAACAACCATAGCTTCAGCTGGGAGTACAACAGAGGCTTTGTCAGTGAATCGAGCATTTCGTGCTATTCGTCGTTCTGATGTTGTTGCTCTTGTCATCGAGGCCATGGCTTGTATCACAGAGCAGGACTACAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTGATAGTTGTAAACAAGTGGGATACAATACCAAATAAAAACCAGCAGACTGCATCATACTATGAGCAAGATGTCAGGGAGAAGCTTCGCTCACTTGACTGGGCTCCAATTGTTTATTCTACTGCTATAGCTGGTCATAGTGTTGACAAGATTATTGTGGCTGCTAGTGAAGTTGAAAAGGAGAGATCAAGAAGACTAGGCACTTCTATATTGAATCAAGTAGTTCAGGAAGCAGTAGCTTTTAAGCCTCCTCCCAGGACACGTGGTGGAAAAAGAGGGCGTGTTTACTATTGCACTCAGGCTGCTATAAGGCCACCTACATTTGTGTTCTTCGTCAATGATGCAAAACTTTTTCCTGAGACTTACCGGCGCTATATGGAGAAGCAACTGCGTTCAGACGCAGGTTTTCCTGGTACACCCATTCGACTTCTCTGGCGCAGCAGAAGGAAAATGGGAAAAGATGAAGGCAAATCTGTAGCAAAGACCCAAGAGAATCTCACATCAAATGATCGAAAATTGGTGTCAACTACACCATAG 1905 0.4535 MARALTLAPISYTLAKTLNPIFPFHNTLPFSSSILSRPKLTRRSLSRSVLRSTAGEFSGSVDDNDEASEDLDELDVVALEQEAKDAVEAYSCSLSQILSIEDQEKNDRKETAQSRRRTPRRTKIIPDNLLPRIAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVITVSKSQATVMEELAITTTIGMDGIPLAVREAAVARMPSMIERQATAAVEESSVIIFLVDGQAGLTAADEEIADWLRKNYSDKYVILAVNKCESPRKRIMQASEFWSLGFEPLPISAISGTGTGELLDLVCSGLQKIEESNNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFQLIDTAGIRKRTTIASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTASYYEQDVREKLRSLDWAPIVYSTAIAGHSVDKIIVAASEVEKERSRRLGTSILNQVVQEAVAFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRYMEKQLRSDAGFPGTPIRLLWRSRRKMGKDEGKSVAKTQENLTSNDRKLVSTTP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01647 634 CDD EngA1 134 322 - -
Pumo11g01647 634 NCBIfam small GTP-binding protein domain 339 495 IPR005225 GO:0005525
Pumo11g01647 634 MobiDBLite consensus disorder prediction 617 634 - -
Pumo11g01647 634 Gene3D - 128 335 IPR027417 -
Pumo11g01647 634 PRINTS GTP1/OBG GTP-binding protein family signature 341 361 IPR006073 GO:0005525
Pumo11g01647 634 PRINTS GTP1/OBG GTP-binding protein family signature 415 433 IPR006073 GO:0005525
Pumo11g01647 634 PANTHER GTPASE DER 104 629 - -
Pumo11g01647 634 MobiDBLite consensus disorder prediction 606 634 - -
Pumo11g01647 634 Coils Coil 64 84 - -
Pumo11g01647 634 FunFam GTPase Der 128 329 - -
Pumo11g01647 634 FunFam GTPase Der 334 516 - -
Pumo11g01647 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 322 IPR027417 -
Pumo11g01647 634 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 339 519 IPR031166 GO:0005525
Pumo11g01647 634 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 131 326 IPR031166 GO:0005525
Pumo11g01647 634 NCBIfam ribosome biogenesis GTPase Der 224 601 IPR016484 GO:0005525
Pumo11g01647 634 Gene3D - 336 519 IPR027417 -
Pumo11g01647 634 CDD EngA2 341 514 - -
Pumo11g01647 634 FunFam GTPase Der 517 605 - -
Pumo11g01647 634 Pfam 50S ribosome-binding GTPase 132 279 IPR006073 GO:0005525
Pumo11g01647 634 Pfam 50S ribosome-binding GTPase 341 462 IPR006073 GO:0005525
Pumo11g01647 634 Hamap GTPase Der [der]. 130 605 IPR016484 GO:0005525
Pumo11g01647 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 299 608 IPR027417 -
Pumo11g01647 634 Gene3D - 521 605 IPR015946 -
Pumo11g01647 634 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 521 602 IPR032859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01647 Pumo-Chr11 47757461 47763927 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01647 - - gmx:100777588 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01647 11 47757461 47763927 Pumo11g01647 11 47757461 47763927 ECH