Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01645 ATGGTTCAGTACAATTTTAAGAAGATTACCGTGGTGCCAAATGGGAAGGATTTCGTCGACATCATCCTCTCTCGCACCCAGCGTCAGACACCAACCGTTGTGCACAAAGGATATGCGATTTCGCGGCTGCGCCAATTCTACATGCGCAAAGTGAAGTATACTCAGCAGAATTTTCATGACAAGCTCTCCACCATAATCGACGAATTCCCCCGGCTCGACGATATCCATCCGTTCTATGGCGATCTCCTCCATGTGCTCTACAACAAGGACCATTACAAGCTTGCTCTTGGCCAAATCAACACTGCCAGGAATCTTATTGGTAAGATTGCCAAAGACTATGTGAAGTTGTTGAAGTATGGTGACTCGCTGTACCGGTGCAAGTGTCTGAAGGTGGCTGCTCTTGGCCGCATGTGCACTGTGATCAAGAGGGTTGGCCCTAGTTTGGCTTATCTAGAACAGGTCAGGCAGCACATGGCTAGGCTTCCCTCGATTGATCCGAATACGAGGACTATCTTGATCTGTGGATATCCTAATGTTGGCAAGAGCTCGTTCATTAACAAGATTACAAGAGCTGATGTGGATGTGCAGCCCTATGCTTTCACTACAAAGTCTCTCTTTGTGGGTCATACTGATTACAAATACCTGAGGTACCAAGTAATTGATACGCCGGGGATTTTGGACCGGCCTTTTGAAGATCGTAATATTATTGAGATGTGCAGTATCACTGCTCTCGCACATTTGAGAGCTGCGATATTGTTTTTCTTGGACATCTCTGGATCTTGTGGTTACAGTATTGCTCAGCAGGCGGCTCTGTTTCACAGCATTAAGTCTTTGTTTATGAACAAACCGTTGATTATAGTCTGCAACAAGACTGACTTGCAGCCACTGAGGGGATATCTGAGGAAGACAGGAAGCTGGTAA 921 0.4615 MVQYNFKKITVVPNGKDFVDIILSRTQRQTPTVVHKGYAISRLRQFYMRKVKYTQQNFHDKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKIAKDYVKLLKYGDSLYRCKCLKVAALGRMCTVIKRVGPSLAYLEQVRQHMARLPSIDPNTRTILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDLQPLRGYLRKTGSW 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01645 306 Gene3D - 162 303 IPR027417 -
Pumo11g01645 306 PRINTS GTP1/OBG GTP-binding protein family signature 219 234 IPR006073 GO:0005525
Pumo11g01645 306 PRINTS GTP1/OBG GTP-binding protein family signature 171 191 IPR006073 GO:0005525
Pumo11g01645 306 PRINTS GTP1/OBG GTP-binding protein family signature 192 210 IPR006073 GO:0005525
Pumo11g01645 306 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 169 306 IPR031167 GO:0005525
Pumo11g01645 306 Pfam Ferrous iron transport protein B 170 227 IPR030389 GO:0005525
Pumo11g01645 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 298 IPR027417 -
Pumo11g01645 306 Pfam Nucleolar GTP-binding protein 1 (NOG1) 236 292 IPR010674 GO:0005525
Pumo11g01645 306 Pfam NOG1 N-terminal helical domain 6 165 IPR041623 -
Pumo11g01645 306 FunFam Nucleolar GTP-binding protein 1 3 161 - -
Pumo11g01645 306 CDD NOG 169 302 - -
Pumo11g01645 306 Gene3D - 3 161 - -
Pumo11g01645 306 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 3 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01645 Pumo-Chr11 47750612 47751532 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01645 K06943 - gmx:100784033 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01645 11 47750612 47751532 Pumo11g01645 11 47750612 47751532 ECH