Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01637 ATGTCAATAGTTCCAATCAACCAAGGTGATGGCAACGGCTCCAACGGCTCTGTAGACTTTTGGGATCCTAATCCCTTTGCCCTGTGGGATCAATTCGTGGATTTTCCTATTCCTCCTTCCATCTCAAGCTTCTTCCCCGGCTTGGAATTCGGATTCGGGTCATCGGTGAACACACGTGTGGATTGGAGGGAGACGCCCAGAGCGCACGTGTGGAAGGTGGTGCTTCCGGGCTTCACCAACGAGGACGTGCTGGTTGAGCTCCAAGAGGAGAGGGTGCTCCAAGTGAGCGTGGAGAGTGGCAACTTCGTGACCAGGTTTAAGATCCCCGACAACGGTAACCTCGAACAACTCAAAGCCAACATGCGTCACGGGGTTCTCGTTCTCACTGTTCCCAAGTTTCATCAACCCACTACTGGCCCTGCTAATAGGAATGTCAGGGTCGTTGAGATTGAGGGCACCGACTGA 465 0.5333 MSIVPINQGDGNGSNGSVDFWDPNPFALWDQFVDFPIPPSISSFFPGLEFGFGSSVNTRVDWRETPRAHVWKVVLPGFTNEDVLVELQEERVLQVSVESGNFVTRFKIPDNGNLEQLKANMRHGVLVLTVPKFHQPTTGPANRNVRVVEIEGTD 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01637 154 SUPERFAMILY HSP20-like chaperones 36 136 IPR008978 -
Pumo11g01637 154 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 51 151 IPR002068 -
Pumo11g01637 154 FunFam 18.5 kDa class I heat shock protein 20 152 - -
Pumo11g01637 154 Gene3D - 21 150 IPR008978 -
Pumo11g01637 154 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 56 150 IPR031107 -
Pumo11g01637 154 Pfam Hsp20/alpha crystallin family 61 147 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01637 Pumo-Chr11 47695574 47696917 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01637 K13993 - gmx:100797426 249.21