Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01621 ATGTCGGGCGGATTCTTTCGAGGCACATCGGCGGATCAGGACACTCGATTTTCGAACAAGCAAGCGAAGCTGATGAAATCGCAGAAGTTTGCACCGGAATTGGAGCATCTGGTGGACATGACGAAGGTGAATATGGAAGTAATTAAGCCTTGGATCACCAGAAGGGTGACCGAGCTTCTCGGGTTTGAAGATGAAGTGCTTATTAACTTCATACACAGTCTTCTGGATGCAAAGGAAGTGAATGGGAAGGAAGTTCAAATACAAATTACTGGATTTATGGAAAAAAACACAGGAAAGTTCATGAAAGAGCTTTGGACGCTGCTTCTCAGTGCGCAGAAAAATGCCAGTGGTGTTCCGCAGCAGTTCTTGGATGCCAAGGAAGAAGAACTCCTGAAGAAGAAGGCTGAAAATGATCGGATAGCAAGTGAAATTCAGAGGAAAAAAGATAAGGAAGGTAGAGAGATCATGGAAGAGAGGCTGAAGAAACTGGACGGTGGATTTGATTCGAAGGATAATGATACTGCATCAGATCCAACTTTGAAGCCCAGGGATTCAGGGTACTACGATCGGGATGGGAAGGAACCTGACAAGAGGAATGGTGTTAGAGCAAGGAGCAGGTTTTCTAGGTCTCCACATTCACCTGCACTTTCCACTTCGCCTCATCGAGGTTCACCTTCAAGGTCAATGAGCAAATCATTTTCAAATTCCCGAAGTTATTCAGGTGGTAGACACAGGTCAAGGAGTATATCCAGGTCTCCAGAGACTCGAGGACGCTCTCTTTCTTCTGAAAGGATTCGCCGTTCTCCACGACGACGATCTATTTCTCCTCACAGGCATTCACCACGACGTTCTCCTCATAGGAGGATACCTTATTCGAGAAGATCTAGATCTCGCTCCAGTTACAGATCTCCTTCTCCTGTACGACGTAGAATGCATTCTCCAGTCCACCGTAGATCACCATCTTTCCGACGACGTAGATCACCTTCTCCTGTGCGACGGCGTAGATCACCTTCTCCGGTACGACGGCGCAGATTGCCTTCTCCGGTACGCCGGCGTAGATCCCCTTCTCCGGTGCGCCGGCGTAGATCACCTTCCCCTGGGCGCCGACACAGATCACCTTCCCCTGGGCGCCGACACAGATCACCTTCTCCTGGGCGCCGACACAGATCACCTTCTCCTCTTGGACGACGGAGGTCACTCTCACCTAGACGACGAAGATCCCCTGTTACTCGACATAGGTCACCTTCACCAGTACGCCGAATACCACCAACCAATGTGAGAAATAGATCAAACTCCCCCATGCAATCCTCCTCCCCCATACGACGAAGGTATGGTAGTAGAACTCCTCCACACTCTCCATCTCCATTGCGACGTAGATCACCTATTCCTGGTAAGAAAAGATCTCCAAGTATCTCCCCACAGAGGTCTCCTCGAGATGAATGGAGTTCTCAGTCTCCAATACGGCGTGTATCTCCATCTCCAATCAGGAAAAATTCTCCAAGACATCAAAGAAGTCCCATGCAGTCTTCTATGGGGAGAGTCAGAACACAAGAAAGGTTGTCATCTGAGACTCGTCAACTCTCTAGTCCTCTGGGATCTGCACGAAGAGATAAAAGTGGCAAAGCTTCACACTATAAATCACAAGATTCAATGTCCACACCTGAGAAGTCTCCAATTCGATCTGTATCTCCAGAAGCAAGGAGTGAGGCCAGCAGTGAAGGTCGAAGGCCTCATGAGAGCCCTATGAAACAAAGAAGAGAAAAGTTGTCCAATGAAAGAAGCGCAAGTCCTCTGAAGAAGCAAAGAACCCAGAAACCTAGCCGTGACAGCCCAGATACAAGAGAAGAAGCAGAAGAAACATACTATTCCAGAGGAAGCAGAGATCCAAAAATGAATTCATCACAAAAGATATCAAAACATTCACCAGTTAGTAAGCGAAAAGGTTCACCTGCAAAATATGGTCATGAGGATGAGTTCTCTCCTGAAAGGGTGTCAGGTCATCCAGCTTCTGAACATCATTATGATAACAATGATTGGAGTAAGAAAGGCCGGGAGATAAAACGTGATAAATCTTCTGGAAAGGGCAATGAATTTCCTGCTCAAAAGTCATCAATGAACAAAGAAACTTTTTCCAGGGAGAAGCCTCAAGAATCTTATGCTGTAGATGTTAAAAAATCAGATGACAAGGACCAATCCCATTCAAACCATGCCAAAAGTAGTGATCGGCACCACAAATCTGAAGCCACTCAAGATTTAGTTGGCAAAGGTGATCGTGTCAATCAGAGTGCTTCATATGATTCTGTTTCTGAGGAAAGTGGTAAGCATAGACGGGAGGGAAAGGATAGGAAAAAGCATAAAAGGTCCGAGAAAAAGTACGCATCTTCTGATGAGGATTATAGTTATGATTCTGAGTTAGAGGACAGGAAAGAGGCTAAGAGGAGGAGAAAAGAGGAGAAGAAGCTGCGGAAGGAGGAGAAGCGTCGAAGACGTGAAGAGAGGCGACGCAAAAGGGAAGAACGGCGTGCGGAGAAGTTGAAAATGAAGAGTAAAACAGACGATATTTCAGATGATGAGGAAGCTGAACGAATGGATTATCATCAAAGTGATAGTGAAGAGACACCATCTGAGCAAAAGAAGCTTGAGATTGAATTGCGGAACAAGGCTCTTGAATCCCTCAAAGCAAAGAGGGGCATGAATAACTAA 2703 0.4628 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWITRRVTELLGFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEELLKKKAENDRIASEIQRKKDKEGREIMEERLKKLDGGFDSKDNDTASDPTLKPRDSGYYDRDGKEPDKRNGVRARSRFSRSPHSPALSTSPHRGSPSRSMSKSFSNSRSYSGGRHRSRSISRSPETRGRSLSSERIRRSPRRRSISPHRHSPRRSPHRRIPYSRRSRSRSSYRSPSPVRRRMHSPVHRRSPSFRRRRSPSPVRRRRSPSPVRRRRLPSPVRRRRSPSPVRRRRSPSPGRRHRSPSPGRRHRSPSPGRRHRSPSPLGRRRSLSPRRRRSPVTRHRSPSPVRRIPPTNVRNRSNSPMQSSSPIRRRYGSRTPPHSPSPLRRRSPIPGKKRSPSISPQRSPRDEWSSQSPIRRVSPSPIRKNSPRHQRSPMQSSMGRVRTQERLSSETRQLSSPLGSARRDKSGKASHYKSQDSMSTPEKSPIRSVSPEARSEASSEGRRPHESPMKQRREKLSNERSASPLKKQRTQKPSRDSPDTREEAEETYYSRGSRDPKMNSSQKISKHSPVSKRKGSPAKYGHEDEFSPERVSGHPASEHHYDNNDWSKKGREIKRDKSSGKGNEFPAQKSSMNKETFSREKPQESYAVDVKKSDDKDQSHSNHAKSSDRHHKSEATQDLVGKGDRVNQSASYDSVSEESGKHRREGKDRKKHKRSEKKYASSDEDYSYDSELEDRKEAKRRRKEEKKLRKEEKRRRREERRRKREERRAEKLKMKSKTDDISDDEEAERMDYHQSDSEETPSEQKKLEIELRNKALESLKAKRGMNN 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01621 900 Coils Coil 801 848 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 303 413 - -
Pumo11g01621 900 SMART pwi_2 40 114 IPR002483 GO:0006397
Pumo11g01621 900 MobiDBLite consensus disorder prediction 247 269 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 569 625 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 210 246 - -
Pumo11g01621 900 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Pumo11g01621 900 MobiDBLite consensus disorder prediction 421 443 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 819 835 - -
Pumo11g01621 900 Coils Coil 123 143 - -
Pumo11g01621 900 Gene3D PWI domain 33 125 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 836 880 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 270 295 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 790 818 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 545 568 - -
Pumo11g01621 900 Pfam PWI domain 46 115 IPR002483 GO:0006397
Pumo11g01621 900 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 407 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 467 533 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 649 695 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 161 880 - -
Pumo11g01621 900 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Pumo11g01621 900 MobiDBLite consensus disorder prediction 707 752 - -
Pumo11g01621 900 MobiDBLite consensus disorder prediction 161 203 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01621 K13171 - gmx:100810238 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01621 11 47526956 47532156 Pumo11g01621 11 47526956 47532156 ECH