Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01576 ATGGCAACGAATTCTTCTAATGGAGCAACCAAGCAACCTCCCATGCCATCTCCCTTGCGTTTTTCCAAGTTCTTTCAGTCCAATATGAGAATTCTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACTTAGTTGATAAATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGACAACTTCTTCACTGGATCTAAAGACAACCTCAAAAAATGGATTGGCCATCCAAGATTTGAGCTAATTCGTCATGATGTCACAGAGCAATTGTTGGTTGAGGTTGATCAAATCTATCATCTTGCTTGCCCTGCTTCTCCAATTTTCTACAAATACAACCCTGTAAAGACAATAAAGACAAATGTGATTGGAACACTGAACATGCTTGGGCTTGCTAAGCGTGTGGGAGCAAGGATTTTGCTTACATCTACTTCCGAAGTATATGGGGACCCTCTTGTGCATCCACAACCAGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTTCGGAGTTGTTATGATGAGGGCAAGCGTGTTGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATCGAAATACGCATTGCGAGAATCTTTAACACATACGGACCACGCATGAATATTGATGATGGGCGTGTTGTCAGTAACTTCATTGCTCAAGCAATTCGTGGTGAACCCTTAACTGTCCAAGTTCCAGGAACTCAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGACTTATACGCCTAATGGAAGGGGAAAACACTGGTCCAATCAACATTGGGAACCCAGGCGAATTTACAATGACTGAACTTGCTGAGAATGTGAAAGAGCTTATTAATCCAGCAGTGGAGATAAAGATGGTTGAGAACACTCCTGATGATCCTCGTCAGAGAAAACCAGACATTACAAAAGCAAAGGAGTTACTGGGATGGGAACCAAAGGTCAAGTTGCGTGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTCAGAGGCTTGGGGTTCCCAAGAAGAACTAA 1029 0.4266 MATNSSNGATKQPPMPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRQRLGVPKKN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01576 342 CDD UGD_SDR_e 29 333 - -
Pumo11g01576 342 Gene3D - 28 338 - -
Pumo11g01576 342 Pfam GDP-mannose 4,6 dehydratase 32 326 IPR016040 -
Pumo11g01576 342 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 15 337 IPR044516 GO:0042732|GO:0048040|GO:0070403
Pumo11g01576 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 23 336 IPR036291 -
Pumo11g01576 342 FunFam UDP-glucuronic acid decarboxylase 6 28 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01576 Pumo-Chr11 47032751 47037677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01576 31 325 Miscellaneous Gene Families AT4G00110 24.545 2.00e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01576 K08678 - gmx:100819843 687.182