Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01575 ATGGCAGATGGAGATCAGGTCAAATCACCAACGAAGCAACCTCCTTTGCCTTCTCCCTTGCGTTTCTCCAAATTCTTTCAGTCTAACATGAGAATCTTGGTTACGGGAGGAGCTGGATTCATTGGTTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTCGTTGTTGCTGATAACTACTTCACTGGAACAAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTCGAGCTTATCCGTCATGATGTCACTGAACCTTTGACGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCCGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTACTCACATCAACATCGGAGGTATATGGGGATCCTCTTGTGCATCCCCAACCTGAAAGCTATTGGGGCAATGTGAACCCTATTGGAGTTCGTAGTTGCTATGATGAGGGGAAACGTGTGGCTGAAACTTTGATGTTCGATTATCATAGGCAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACATATGGGCCGCGCATGAATATTGATGATGGACGTGTCGTCAGCAACTTCATTGCTCAAGCGATTCGTGGTGAACCCTTGACTGTCCAGTCTCCAGGAACACAAACTCGCAGTTTCTGCTTTGTCTCTGATCTGGTTGATGGCCTTATCCGTCTCATGGAAGGATCCGACACTGGGCCAATCAACCTTGGAAATCCAGGTGAATTTACAATGCTTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAGGTGTGGAGATAAAGGTAGTGGAGAACACTCCTGATGATCCGAGACAGAGAAAACCAATCATAACAAAAGCAATGGAATTGCTTGGCTGGGAACCAAAGGTTAAGCTGCGAGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTTTGAGGCTTGGAGTTGACAAAAACTAA 1029 0.4402 MADGDQVKSPTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVVVADNYFTGTKDNLKKWIGHPRFELIRHDVTEPLTIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQSPGTQTRSFCFVSDLVDGLIRLMEGSDTGPINLGNPGEFTMLELAETVKELINPGVEIKVVENTPDDPRQRKPIITKAMELLGWEPKVKLRDGLPLMEEDFRLRLGVDKN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01575 342 CDD UGD_SDR_e 30 334 - -
Pumo11g01575 342 FunFam UDP-glucuronic acid decarboxylase 6 29 338 - -
Pumo11g01575 342 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 18 338 IPR044516 GO:0042732|GO:0048040|GO:0070403
Pumo11g01575 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 334 IPR036291 -
Pumo11g01575 342 Gene3D - 29 336 - -
Pumo11g01575 342 Pfam GDP-mannose 4,6 dehydratase 33 327 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01575 Pumo-Chr11 47026534 47031179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01575 27 326 Miscellaneous Gene Families AT1G02000 22.985 7.99e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01575 K08678 - gmx:100818771 665.996