Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01564 ATGTCGGTGAGTTCCACTTCCAGGGGAAGAATAACGACGGAGCTTCAAGTCCCGAAGAAATGGACAGACAGAGAAACCAGTCCAGAGAGAACCAAGGTTTGGGCCGAGCCCAAGCCCAAAACCGCCAGAAAAGTCTCCGTCGTTTACTACCTCTCCCGAAACGGCCAACTCGAGCACCCTCATTTCATGGAGGTTCCTCTCTCTTCGCCTCACGGACTCTACCTCAAAGACGTAATCAACCGCTTGAACGCTCTCCGAGGGAAAGGCATGGCCAACTTGTACTCTTGGTCCGCCAAACGGAGCTACAAAAACGGCTTTGTTTGGCATGATTTGTCGGAGAACGATTTCATCTATCCGACGCAGGGGCAAGACTACATTCTCAAAGGATCGGAGATTGTTGAACACGCTGGCGCCAAGGTTAACAAATCGGAGGAAGAATCCGATTCGTCGGTGGTGATCACGAGGCGGCGGAACCAGTCGTGGAGCTCTATCGATATGAACGAATACCGAGTTTATAAGTCGGAATCGTTCGGTGACTCGGCCGGGAGAATCGCCGCCGACGCGGCGACTCAGACGGAGGAGAAGCGGAGGCGGAGGAGGGCGGTGAGGGAGGAGGAAGCGGAAGAGATTCAAACGAAGAATGGAATTGAAGCGGAAATGGAGGGAGAGAAGGGAACGCACGTGACTTGTGATGATAATAATCACACTACGGAGCTGAGTAGGGACGAGATCTCGCCTCCACCGTCGGATTCGAGCCCCGAGACGCTGGAGACGCTGATGAAGGCGGATGGACGGCTTGGATTGCGGTCTTCGGAATCCGAGAAGGACAATCTGACGGTGGAGAGCTGTCCTAGTGGGAGGATGAGAGCTTCGTCGGTTTTGCTACAGTTGTTATCGTGCGGTGCGGTGTCGTTTAAGGAGTGTGGGGCCAATGCGGTGAAGGATCAAGGGTTCTCGTTGGTTGGGCACTACAAGTCCAGAATGCCCAGCGGAGCAGGGGATCATTCGGGAAAGGAAACGGGGACATCGATGGAAATTCCTGATTTGAGCAGGGTGAGGTTGGAAGATAAAGAATATTTTAGTGGGAGCTTGATCGAAACTAAGAAAGTGGAAACCCCTGCTTTGAAGAGGTCCTCTTCTTACAATGCAGATAGCGGTTCCCGGTTGCAAATAGTGGAGCATGAAGGAGAAGTAGTGCGGGCAAAGTGCATACCGCGGAAGTCTAAGACACTACCAACAAAAAAAGAAGAGGGTGCTTCCATGCATAATGCTAGTGGTGGTGGCCAACATGGGAGCAAAAGATTCGACGCACAACAATAA 1320 0.5235 MSVSSTSRGRITTELQVPKKWTDRETSPERTKVWAEPKPKTARKVSVVYYLSRNGQLEHPHFMEVPLSSPHGLYLKDVINRLNALRGKGMANLYSWSAKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEIVEHAGAKVNKSEEESDSSVVITRRRNQSWSSIDMNEYRVYKSESFGDSAGRIAADAATQTEEKRRRRRAVREEEAEEIQTKNGIEAEMEGEKGTHVTCDDNNHTTELSRDEISPPPSDSSPETLETLMKADGRLGLRSSESEKDNLTVESCPSGRMRASSVLLQLLSCGAVSFKECGANAVKDQGFSLVGHYKSRMPSGAGDHSGKETGTSMEIPDLSRVRLEDKEYFSGSLIETKKVETPALKRSSSYNADSGSRLQIVEHEGEVVRAKCIPRKSKTLPTKKEEGASMHNASGGGQHGSKRFDAQQ 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01564 439 PIRSF UCP031043 12 426 IPR021182 -
Pumo11g01564 439 MobiDBLite consensus disorder prediction 240 255 - -
Pumo11g01564 439 MobiDBLite consensus disorder prediction 1 26 - -
Pumo11g01564 439 MobiDBLite consensus disorder prediction 183 255 - -
Pumo11g01564 439 MobiDBLite consensus disorder prediction 189 239 - -
Pumo11g01564 439 MobiDBLite consensus disorder prediction 403 439 - -
Pumo11g01564 439 Pfam Protein SOSEKI, plant 140 385 IPR010369 -
Pumo11g01564 439 Pfam Protein SOSEKI, plant 45 141 IPR010369 -
Pumo11g01564 439 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 24 432 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01564 Pumo-Chr11 46909410 46913418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01564 - - gmx:100779732 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01564 11 46909410 46913418 Pumo11g01564 11 46909410 46913418 ECH