Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01562 ATGTCTCGTATCTCCACACTCTATCTTCTCGCTTACAACTCCCTTCAGGCCATTGGATGGGCGATTTCTTTAACTAAGATTTTGTACAATCTTCTCGCCACTGCTTCCATTAACGGAACCTATGCTTCCGCCGGCAACTTAATCTGTTTTCTGCAATGTGCTGCATTCTTGGAAGTTATACACGGAGCCATTGGCATTGTGCCCAGCGGGGTTTTGCTTCCTCTTATGCAATGGGGAGGAAGGACGCACTTTGTGCTTGCTATTGTTCGGAAACTTGATGAGCTCCAGGAATTACCTTCAGTTTTTATCACTTTTCTTGCATGGAGCATGGGTGAGGTCATTAGATATTCACATTATGCTTTCGGTTGTTTGGGAAATTGTCCTTCTTGGATTACCTATCTCAGGTACACTGCGTTTATTGTGCTGTATCCTTTGGGAGTGGGTCCTGGTGAAATATGGATTATGTACCAAGCGCTTCCAATTATAAAGAAGAAGAATCTCTATGCAGATTCCTTTTCAAGCCTCCCATTTAGTTATTATGATTTCCTTAAGGTTGTGCTGGTAGTTTATCCATTCCTCTGGTTCAAACTTTACCTGCATATGTTCAAGCAACGACGTACAAAACTTTATAAACGCCATGACAAGAAAAGGGCATGA 657 0.4231 MSRISTLYLLAYNSLQAIGWAISLTKILYNLLATASINGTYASAGNLICFLQCAAFLEVIHGAIGIVPSGVLLPLMQWGGRTHFVLAIVRKLDELQELPSVFITFLAWSMGEVIRYSHYAFGCLGNCPSWITYLRYTAFIVLYPLGVGPGEIWIMYQALPIIKKKNLYADSFSSLPFSYYDFLKVVLVVYPFLWFKLYLHMFKQRRTKLYKRHDKKRA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01562 218 Pfam Protein tyrosine phosphatase-like protein, PTPLA 52 209 IPR007482 -
Pumo11g01562 218 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 5 211 IPR007482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01562 Pumo-Chr11 46860780 46864137 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01562 K10703 - gmx:100527607 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01562 11 46860780 46864137 Pumo11g01562 11 46860780 46864137 ECH