Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01538 ATGGACGACGAATTGCTCGAGCTGCAGCGACAATTCGAGTTCGCGCAGCAAGCCAAGTCCAGCATTCGATTATCGGAGCGAAACGTCGTCGAATTGGTCCAAAAACTGCAGCAACTCCAAATCATTGATTTCGAGCTTCTCCACACTGTCTCCGGCAAAGAGTACATCACTCTCGATCAACTGAGGAACGAGATGGTGGCGGAGGTGAAGAAATTAGGGCGCGTTTCTTTGATCGATCTCGCTGATGCTACTGGAGTTGACTTGTACTACGTCGAGAAGCAGGCTCAGAGCGTTGTAACGGAACACCGAGAACTCATGTTGACTCAGGGAGAAATCATGTCGGAGTCTTATTGGGACTCAATCGCAGAAGAGATTAACGAGAGGCTTCAGGAGTGTAGTCAGATTGCGCTGACGGAACTCGCGGCGCAATTGAACGTAGGTTTGGACTTGGTTTCCTCCGTGTTGGAGCCGCGCCTTGGAACAATTGTGAAAGGAAGGCTTGAAGGTGGGCAGTTGTATACTCCTGCCTATGTGGCTCGTGTTGGTGCCATGGTCCGTGGCGCTGCGCGGGGCATCACCGTTCCCACGAATTTGACTGTGGTATGGAGCTCATTGCAGCAGTTGCTGCAAGAAATTGATGGAACCAGTGGTTTGGCTGTTGAAGGATCTTTCTTCCAGTCTTTGTTTAATGGACTTGTGAAGGAAGGCGAGGTTCTAGGGTCGCTTCGTGCAGGAGTACACTGGACGCCAGCTGTATTTGCTGTTGCTCAAAGGGAGTTTGTGGATTCATTCTTTTCTCAGAATTCTTTTATCACATATGAGGCGCTGCACAAACTTGGAATTCCCCAGCCTATTCAATTCTTGCAGTCCAGATATCCTGAAGGCAAACCTCTAGTCACAACATTTGTTCATCCATCTATGATTGAGATGCTAGATGCTTCTACTGAGGATGCTCTTGACCGTGGTAGCTGGAGTGATTCTCTTTCCTTATTGCCTTCATCATTTACACCTCAAGATGCTTCTAAAATGTTGTCCCTCTGTCAATCTGTTCAAAATGCTCTTAAGTCTAACAAAGCACACATTTTTGGGGATTTTTATGTGTTGAGCAGCAGCTTTATAAAGGAAATCTGTGATCGTGTTGTGAAAGAATTGGAGACATTAGGTGTTTCAGGGTCTGCTGGCAGTACAATGCCTGGTGATTTTCAAGTACCCAATGAAGCTAAAGTAGGGCATGAGTCAAGCAGGTTGAATGAGTCCAATGAGATGGTGAGTGATGGTGGTGCCAATAGGCATGCTGATAAAGGATCAAAGAAGAAAAAGGGGAAAGCCACAGGGAATGCAGTAGCAAATCTATCTGAAAGTGGTGCAGATAACCAGGAACAGACTTTGACAAAATCTAAGAAAGGCCAGAAAAGGGGTAAGGGTACATCTTCACAAACGTCAGATTCAAAGACAGGTTCTAGGAAAGAATCGCTTAAAATGAAAGAGGATAATCTCAGTCCCTCAGAAGAATGGATCATGCAGAAAATTACAGCATTGGTTTCCTATTTTGAAGAACAAGGTATAGATGATCCTGAAACAATTCTTAGGCCTTTGGCTAACCAATTAAGGCCTACAATAATCAGTTCTTGGATGGAGAAAAAGAAGGCATTGCTTACAAACAATGCAGAAAGAATGAAACGTTTGCTTGATAATTTGCAGAAGAAGCTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGGCATTTACTAAGGACAGTAGCAGCTCCTATGGTGGATATGCTTCTTCAAAACCTGGATGAGCACAACAAATTAAAGAATGGACATGACGTGCAGGAAGCTCCAAATTCTGAATCTGTTTCACTTAGTCCTGGAGACAGAACTGCAATTTGTAAGAGTTTTCCAGGAGCTCTTGCAAATAAGGCTCTTGCTGTTGTAGAAGCATTGGAAGGAAAGAGTGTGGAGACATTCATGGCTGCTTTTAGAATGGTAACAGAAGAGAGTGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTTTACATTCATATCGGAAGGAATTGACATCTCAAGTTTCTGCTGAGACTGACCCTGTATCACTTCTGCCAAAAGTTGTGTCTTTACTTTATATCCAGGTTTACCACAAAGCTCTTCAAGCTCCTGGAAGGGCCATTTCTGTTGCTATTTCCCATTTAAAGGATAAGCTAGACGAGTCAGCATGCAAGATTTTAACTGATTATCAAACTGCCACAGTGACTCTTTTGACACTATTAGCAGCTTCACCTGGTGATGAAGAGGATTGTGCATCTGATAGGATTTTGAGTAAAAAGGAGCTTCTAGAGAGCCAAATGCTGGACCTCAAAAGCTTGGTTTTGAGCACCTCCCAATCTTCATAA 2460 0.4358 MDDELLELQRQFEFAQQAKSSIRLSERNVVELVQKLQQLQIIDFELLHTVSGKEYITLDQLRNEMVAEVKKLGRVSLIDLADATGVDLYYVEKQAQSVVTEHRELMLTQGEIMSESYWDSIAEEINERLQECSQIALTELAAQLNVGLDLVSSVLEPRLGTIVKGRLEGGQLYTPAYVARVGAMVRGAARGITVPTNLTVVWSSLQQLLQEIDGTSGLAVEGSFFQSLFNGLVKEGEVLGSLRAGVHWTPAVFAVAQREFVDSFFSQNSFITYEALHKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIEMLDASTEDALDRGSWSDSLSLLPSSFTPQDASKMLSLCQSVQNALKSNKAHIFGDFYVLSSSFIKEICDRVVKELETLGVSGSAGSTMPGDFQVPNEAKVGHESSRLNESNEMVSDGGANRHADKGSKKKKGKATGNAVANLSESGADNQEQTLTKSKKGQKRGKGTSSQTSDSKTGSRKESLKMKEDNLSPSEEWIMQKITALVSYFEEQGIDDPETILRPLANQLRPTIISSWMEKKKALLTNNAERMKRLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLQNLDEHNKLKNGHDVQEAPNSESVSLSPGDRTAICKSFPGALANKALAVVEALEGKSVETFMAAFRMVTEESGLPLKKLDKKLERTLLHSYRKELTSQVSAETDPVSLLPKVVSLLYIQVYHKALQAPGRAISVAISHLKDKLDESACKILTDYQTATVTLLTLLAASPGDEEDCASDRILSKKELLESQMLDLKSLVLSTSQSS 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01538 819 MobiDBLite consensus disorder prediction 389 500 - -
Pumo11g01538 819 MobiDBLite consensus disorder prediction 486 500 - -
Pumo11g01538 819 MobiDBLite consensus disorder prediction 447 463 - -
Pumo11g01538 819 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Pumo11g01538 819 Coils Coil 549 583 - -
Pumo11g01538 819 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 818 IPR018611 GO:0061666|GO:0071569
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01538 1 785 EF-hand Containing Proteins AT3G46220 63.278 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01538 K22755 - gmx:100808087 1441.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01538 11 46455051 46464040 Pumo11g01538 11 46455051 46464040 ECH