Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01488 ATGCATCAAGTGCTCATTGCCAATACAAATTCAACCATTAATTTGCATTCATATCCAAAAGCACCAGAGCCTTCATTCACCAAAACTAAAATCATGTTGAAGAAGAAATCTCGCTTGTCCTTCTCACTAGCACTGCTAGTTTCATTTTTGTATTCCACCACCACTTTAGCTCAATTATCACCAGCTTCTGCCCCTCTCAAACCAACCCAACCTACCACTACCCCACCAGTTGCAGCTCCTCAACAACCATTGGTTCCTTCATTGCCACAATCACCAAGTGATTCCACCCCTGACAGTACTCCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCCAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACACAATTGATCAACCAACTCAATGCACAGCTCCTAACTACTAAATCAGGTGGCATAACAATTCTTGCCCCAGATGACAGTGCTTTCTCTGAACTCAAAGCAGGGTTTCTCAACTCTCTTTCTGATGGACAAAAACTCGAGCTCTTACAGTTTCACGTTCTTTCAGACTATGTGTCTAGCTCCAACTTTGATACACTGACGAACCCAGTGAGAACACTAGCAGGAGCTAAGCCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGCGGGAGTGTGAACATATCAACGGGTGAGGTTAACACCACCATCACTGGCATTGTATATACAGATAAGCATCTAGCTATATATAAGGTGGGTAAGGTGCTTCTTCCTATGGACTTCTTTGCAGTTGCTAAGGCACCTGCAAAGTCACCCTCATTGGCTCCAGAGCCTTCAGCAAAGGCTCCTAAAGCTGATAAGGAGCCATTATCCCCAGATTCCTCAGAATCATCTCAAACTAATCCCACAACCGAGAACTCTAGCACTGTGAAAATGAATGTGCATGGAAAGTGGGTGTCCTTTGTTCTTGGACTAGTTCTCATGACTGTATTCTCATCATAA 972 0.4403 MHQVLIANTNSTINLHSYPKAPEPSFTKTKIMLKKKSRLSFSLALLVSFLYSTTTLAQLSPASAPLKPTQPTTTPPVAAPQQPLVPSLPQSPSDSTPDSTPAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFAVAKAPAKSPSLAPEPSAKAPKADKEPLSPDSSESSQTNPTTENSSTVKMNVHGKWVSFVLGLVLMTVFSS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01488 323 ProSiteProfiles FAS1/BIgH3 domain profile. 102 246 IPR000782 -
Pumo11g01488 323 SUPERFAMILY FAS1 domain 99 249 IPR036378 -
Pumo11g01488 323 SMART fasc_3 144 249 IPR000782 -
Pumo11g01488 323 FunFam Fasciclin-like arabinogalactan protein 11 87 248 - -
Pumo11g01488 323 Pfam Fasciclin domain 114 248 IPR000782 -
Pumo11g01488 323 Gene3D FAS1 domain 87 248 IPR036378 -
Pumo11g01488 323 MobiDBLite consensus disorder prediction 260 299 - -
Pumo11g01488 323 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 38 303 IPR045003 -
Pumo11g01488 323 MobiDBLite consensus disorder prediction 62 99 - -
Pumo11g01488 323 MobiDBLite consensus disorder prediction 282 299 - -
Pumo11g01488 323 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01488 Pumo-Chr11 45645490 45646526 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01488 - - gmx:100792674 441.81