Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01476 ATGGGTAGAAGAAAGTGGAGCATCTTGGTGGCCATCTTCATCTTACTTCTTGCTATGGAAGCCGCCATGGCTCAAGGTCAAGGAAATGGCAATGGCAATGGCAAGGGTAATGATAAGGAACAGAAGGAGAAGGAGAAAAAGGAGAAAAAGGAAAAGGAAAAGGAGAAAAAGGAAAAAGAGAAGAAGGCAAAAAAGCAACGTGAGGAAGCCTCAAATTATGACAAGCTGTCACCTCTGCCAACGGGTCAAGAACGAGGGTTCTGCAGAACAAACACTACCTGTGAGTTTAAGACCATAGTGTGTCCATCCGAGTGCGCAAAGAGGAAGCCCAAGAAGAACAAGAAGCAGAAGGCATGTTTCATTGACTGCAGCAGTAGCACATGTGAAGCCACTTGCAAGATAAGAAAAGCCAACTGTGATGGATATGGTGCTTTGTGTTATGATCCTCGCTTTGTTGGTGGTGATGGTGTCATGTTCTACTTCCATGGTGCCAAAGGAGGAAACTTTGCCATTGTTTCTGATGATGAGTTCCAAATCAATGCTCACTTCATTGGTACTCGACCACAAGGAAGGACTCGTGACTACACATGGGTGCAAGCACTTGCTGTCATGTTTGACACACACACTCTTGTCATTGCAGCCAATAGAGTATCTCACTGGGATGACAATGTTGACTCTCTCATAGTAAAGTGGGATGGTGAACAAGTCAACGTTCCCACTGATGGAGAGGCTGAATGGAGGGCCAATGGTGATGAAAGAGAAATGGTTGTGGAGAGAACTGATGATACCAACAGTGTGAGAGTCATAGTTTCAGGTCTGGTTGAGATGGACATTAGTGTGAAGCCCATTGGAGAGCAAGAAAACAAGGCTCACAATTATCAGTTGCCATCAGATGATGCTTTTGCTCATTTGGAGACACAGTTCAGGTTTAAGAAAAGTACTGATAATTTTGAAGGAGTTTTGGGTCAGACTTATAGGCCAGGGTATGTCAGCCCTGTCAAAAGAGGGGTTCCTATGCCAATGATGGGTGGGGAGAACAAGTACCAGACTCTCTCTCTGTTTTCAACATCTTGCAACCTATGCAGGTTCCAGAGGCCATCCGAGATAGCAAGCACCGAAGGACTAGTTGCGAAGTACTGA 1140 0.4518 MGRRKWSILVAIFILLLAMEAAMAQGQGNGNGNGKGNDKEQKEKEKKEKKEKEKEKKEKEKKAKKQREEASNYDKLSPLPTGQERGFCRTNTTCEFKTIVCPSECAKRKPKKNKKQKACFIDCSSSTCEATCKIRKANCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALAVMFDTHTLVIAANRVSHWDDNVDSLIVKWDGEQVNVPTDGEAEWRANGDEREMVVERTDDTNSVRVIVSGLVEMDISVKPIGEQENKAHNYQLPSDDAFAHLETQFRFKKSTDNFEGVLGQTYRPGYVSPVKRGVPMPMMGGENKYQTLSLFSTSCNLCRFQRPSEIASTEGLVAKY 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01476 379 Pfam Root cap 307 363 IPR009646 -
Pumo11g01476 379 Coils Coil 35 76 - -
Pumo11g01476 379 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 5 367 - -
Pumo11g01476 379 MobiDBLite consensus disorder prediction 27 78 - -
Pumo11g01476 379 MobiDBLite consensus disorder prediction 36 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01476 Pumo-Chr11 45246448 45247880 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01476 - - gmx:100789697 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01476 11 45246448 45247880 Pumo11g01476 11 45246448 45247880 ECH