Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01473 ATGACAAAGAGAATACGTTTGGATTGTTCCTTGCAGGAGGATGAAGAGAAAGTGAATAATAATAGCTTTGTGGAATTGGATGCAAGGGAAGGAGTGAATGATGGTTTTCCTAGAATTGGACCAAATGATTCGCTTCTCCCTGGTCTTTTTGATGATGTTGCCCTGAATTGTCTTGCTTGGGTTAGTAGATCTGATTATGCTTCACTAGCATGTATAAATAAAAGGTACAACTTGCTGATTAGGAGCGGGTATCTGTCCGGGTTGAGGAAGAAGTTGGGGATTGTTGAGCTAGAGCATTTGGTTTATTTGGTTTGTGATCCAAGAGGGTGGGAGGCATTTGAACCCAAGAGAAATAGATGGATAACATTACCTAAGATACCTTGTGATGAGTGTTTTAATCATGCAGACAAGGAGTCCTTGGCTGTGGGGAGTGAATTGTTGGTTTTTGGTCGGGAATTGATGGATTTTGCCATTTGGAAGTACAGCTTGATTTCCCGTGGTTGGGTGAAGTGTAAGGAGATGAACCATCCTCGCTGCTTGTTCGGATCTGGCAGTCTTGGTTCGATTGCTATTGTTGCTGGTGGAAGTGATAAATATGGAAATGTTCTTGAATCGGCAGAGTTGTATGACTCAAATTCAGGTACATGGGAACTATTGCCGAACATGCATACACCACGTAGATTGTGCTCTGGTTTTTTTATGGATGGCAAATTCTATGTGATTGGTGGCATGTCAAGTCCTACTGTTTCATTGACTTGTGGGGAGGAGTATGATCTTAAGACGAGAAATTGGCGGAAAATAGAGGGTATGTATCCATATGTTAATGGGGCTGCTCAGGCACCTCCACTTGTGGCAGTTGTGGATAATCAGTTGTATGCAGTTGAGCATCTTACCAACATGGTGAAGAAATATGACAAGGAAAGGAACACCTGGAGTGAATTGGGAAGGCTTCCAGTACGGGCCGATTCTTCCAATGGATGGGGCCTGGCTTTCAAGGCTTGTGGAGAGAAACTTCTGGTTGTGGGTGGACAAAGGGGTCCAGAAGGTGAAGCTGTTGTACTGAATTCATGGTGTCCTAGGACAGGAGTCAGGAATGGAACCATAGATTGGCAAGTACTTGGTGTGAAGGAACATGTTGGGGTGTTTGTGTACAATTGTGCTGTTATGGGATGGTCTGGTGAGATGCTTTTAGATTGA 1197 0.4369 MTKRIRLDCSLQEDEEKVNNNSFVELDAREGVNDGFPRIGPNDSLLPGLFDDVALNCLAWVSRSDYASLACINKRYNLLIRSGYLSGLRKKLGIVELEHLVYLVCDPRGWEAFEPKRNRWITLPKIPCDECFNHADKESLAVGSELLVFGRELMDFAIWKYSLISRGWVKCKEMNHPRCLFGSGSLGSIAIVAGGSDKYGNVLESAELYDSNSGTWELLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYDLKTRNWRKIEGMYPYVNGAAQAPPLVAVVDNQLYAVEHLTNMVKKYDKERNTWSELGRLPVRADSSNGWGLAFKACGEKLLVVGGQRGPEGEAVVLNSWCPRTGVRNGTIDWQVLGVKEHVGVFVYNCAVMGWSGEMLLD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01473 398 Gene3D - 101 375 IPR015915 GO:0005515
Pumo11g01473 398 SMART kelc_smart 237 289 IPR006652 GO:0005515
Pumo11g01473 398 SMART kelc_smart 189 236 IPR006652 GO:0005515
Pumo11g01473 398 CDD F-box_AtAFR-like 45 89 - -
Pumo11g01473 398 FunFam F-box/kelch-repeat protein SKIP11 91 375 - -
Pumo11g01473 398 SUPERFAMILY Kelch motif 109 348 IPR015915 GO:0005515
Pumo11g01473 398 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 43 390 - -
Pumo11g01473 398 Pfam Kelch motif 177 222 IPR006652 GO:0005515
Pumo11g01473 398 Pfam Kelch motif 225 270 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01473 Pumo-Chr11 45206814 45208010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01473 49 268 Miscellaneous Gene Families AT4G33900 27.477 5.42e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01473 - - gmx:100792139 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01473 11 45206814 45208010 Pumo11g01473 11 45206814 45208010 ECH