Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01472 ATGGTCACAGGGAACATATTTGAGAAGAGGGACATCATAAGCACTATGCCTGATGACATCATAGGGAATATTCTGTCTCGTTTGACATTAAAAGAAGCTGTTAGGACTAGCGTGGTTGCAACTAAATGGAGATATCACTGGACCTATTTCTCTGGGGTCATGGACTTTGATCATTCACTTACGAACTTTCACTTGCGTCGAGAACGTGTTGGACTTTTGACTAAGTGCAATGTTTTTGTTTGTGAGTGGGAGAGGTTCATGATCGGTTTGGCAAATGTGATGAAATCACTGAAGAGCCCCTCCATGCAAGGACTCAGAATTTGCATGGATTTGGGTAACCCTTGGAGGGTAGCTGAGTGGGTTAAGTTTGCTGCTGAGAAGAATGTTCAAACGTTGGACCTGGATTTCTCATACCATTTCTCAGAACCATTCTATGAAATAAGTGAGACCATTCGTAATGTCTTTCCATCCAAGAGTTTTGAAATGAAGTCACTGTGTAAGCTGCGTTTGTCTTCTGTGGACGTGAGTGGTGAAGTCATTGAGGACATTCTAGCATGTTGTCCATTGCTTGAAACAATATGTGTCATAGAATCAAAACGCCTTGTGCACTTGAAAGTTTGGGGTGAAGGACTGAGGCTGAAGCATTTGGAGTTGGTTGAGTGCCACATTTTTTATCTTGACATCTGTGCTGAAAACCTCATGACATTTAGGTACTCTGGGGATTATGGAAAGTTTAACTTTAAAAGTGTGCCAAGCCTCGTGGAGGTTTCCTTTGGAGGAAACTTTTGTAGTTACCTGCAATCTAACATGGACGATGCTGATTTTTATGGAGTATTGTTGCAGGAAATTCATGAAGGCCTGCCTGTGTTTGATAATGTGAGGCAGCTGGAAATGCTAATTCCTCACAGGTGTGGAGCGGTGCTTGATCGTCCTCTTTCTTTACTAAGTGCTTTCCTTTCAATATGTGTGCTTAAGATTAAGTTCCATAGGACCAATATCAGTGAAGTGGAGCATGAGTGGAAGGCCAACCTGAATCATGAGTTTCCAAACCTGAGGGAACTGGAAGTGTCAGGGTACAGAAGAGACCCTAGTCAAATTGAGCTGCTGGTCAGCATATTTAAGAAGGCTCCTAATCTCAACAGGGTTGTTGTGGATCCCTTGGCTTCAATGCATGTGCATAAGTCACCTGATGCCAAGGCCAGGATTAGAGAAATGGGGCGTGAGTCCACCACATGGCTTGCTGATGCTCTAAAACGTCATCTTTCTCCTTTAACTCAGTTGATTGTCCTCTAA 1293 0.4308 MVTGNIFEKRDIISTMPDDIIGNILSRLTLKEAVRTSVVATKWRYHWTYFSGVMDFDHSLTNFHLRRERVGLLTKCNVFVCEWERFMIGLANVMKSLKSPSMQGLRICMDLGNPWRVAEWVKFAAEKNVQTLDLDFSYHFSEPFYEISETIRNVFPSKSFEMKSLCKLRLSSVDVSGEVIEDILACCPLLETICVIESKRLVHLKVWGEGLRLKHLELVECHIFYLDICAENLMTFRYSGDYGKFNFKSVPSLVEVSFGGNFCSYLQSNMDDADFYGVLLQEIHEGLPVFDNVRQLEMLIPHRCGAVLDRPLSLLSAFLSICVLKIKFHRTNISEVEHEWKANLNHEFPNLRELEVSGYRRDPSQIELLVSIFKKAPNLNRVVVDPLASMHVHKSPDAKARIREMGRESTTWLADALKRHLSPLTQLIVL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01472 430 SUPERFAMILY F-box domain 9 49 IPR036047 GO:0005515
Pumo11g01472 430 Gene3D Ribonuclease Inhibitor 80 386 IPR032675 -
Pumo11g01472 430 PANTHER F-BOX PROTEIN-LIKE 11 380 - -
Pumo11g01472 430 Pfam F-box domain 13 47 IPR001810 GO:0005515
Pumo11g01472 430 SUPERFAMILY RNI-like 127 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01472 Pumo-Chr11 45193251 45204946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01472 11 292 EF-hand Containing Proteins AT5G41840 28.082 1.40e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01472 - - gmx:100778140 654.055