Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01448 ATGTTAGAGGACATTGAATCATCTACTCAGCTTTGTAAAATGGGATTTGGTCGAAATTCGACCTCGAGAAGTGGAGATTACTTGGAAGGGATGCTTAATGACTATGTTGGAGGAAGGAACAAACTGAAGGCTCAGAAAAGTGCCTCCACAACAAAGTTTGTGGCAGCACTCACATGCCTTCAGTTTTTCTTTGCAGTTTATGCAACGTTCCTATTGTATTACATGGGCCCTTCCATTGATTTGAGAACCAAGCCAGAGTTCACATGGGCTACAAAAATTGCCCAACAATGGAAGCAACTTATGATCACACCCCATGTTGTTGGTCACTACCAAGAAGCTGCTTCTTCTCTCATCAAGGAGGATGATTTTCCCACAACTCCAACCCAAGTGTGCGAGAATGAGAAGATAGACTTCATGCAAAAGAAGTCCAATGATGTCCAAATGATCAAGTTAAAGAGAGAGCTCTACGATGAGGTGTTGAACTTCCAAAGCAAAACCATTGGCACTGAGACTCTCCAAGAGCTAATGGCAATGAAATCCAAGTGGGACTTGAAGGGTCCAAACAGGCCAAAAATCACAGTCTTGCTAAACCACTTCAAGAGAAAGACACTTTGTGCTCAGCTTGATTCTTTGCTCCAACAGACCCTCCCTTTCCATCATGTTTGGGTGCTTTCATTTGGGAGCCCCAATGAAGCCTCATTGAGGAGAATTGTGGACACCTATAATGACTCAAGAATCAGCTTCATAAGCTCAAACTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAGACTGAAGCTGATCTTGTGTATGTTGTTGATGATGACATGATTCCTGGAAGGAAGATGTTGCAGATTTTGGCACACGTGGCTGGGACAGAAAAGTACAAGAATTCTGTTTTGGGGAGTATTGGAAGGATATTGCCATTTAGACAGAAGGATTTCACTTTCCCAAGTTACAGAAAATTTCGGTCTAAGGAGGCAGGGTTGTATTTGCCTGATCCTGCTTATGATATCACTGTTGATAAAATTGTGCAGGTGGATTTTCTATCTAGTTCATGGTTTCTCTCTGCTGATCTTGTCAAGACACTATTCATTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTGCACCTCAGCTATCAGCTTCAGAAGTACAAAAATGCTGGCTCATTTGTTCTTCCAGTGGACCCTAAGGACAAGGAAACTTGGGGTGATAGTGAGCACAGGCTTGCATATGTGTCTGAAACCACAGTGATTTTCAAGGACGTGGTTCAAGTCAGAGATGATCAATGGTGGAAAGCACTTTCCACAGGCTATGTGACTCAGTGGGCTGCAATGTACCCTCAAAAAATTGATGCACTCTTTTATGCTCACTCAGTTGATGAAGTGAAAGTGCTTGCACCACTTCTTGAAAAGTTCAGGTCCACAGTTGGCAAGAAGGCCTACATTGTTGTCTCTGGAGGAAGTTTCTGCCCCTGTGAAGATGCTGCAACAGCTCTCAAATGGCCTGCATTGGTCTGCAAAGAACGGAGGTTTAAGATTTTTGATTTGGCTATTGAAGCACTTTCTGGGGTGTCAGACTCTGAGGCACCAGTGATACATGCAGTGTACACCAGCGTGAAGGGTTTGATCAAAATTCACAATCCCAGTGTAGTGATCAGTGTGGCTGAAATTGACCCTCATGTGAGAAAAGCTCTCAAGATGGCATCAGAAACCAACTCAAACGGCACCACATTGGTTCTTTTACCAAGGGCTTCAGTTTCTCAAGTTCTTTGGATGGCTGATCTGCGTTCAACAGCATTACCAAATTGGAATCGGATGAGGGTCTCTGTGAACATCATCACCCAAAATAGAGCCAATTCACTAGCAAGGCTTCTCAAATCTCTCAGCAATGCTTACTATCTTGGAGATGAAATTCCAATTACCTTCAACATGGATAGCAAGGTAGATGAGGCAACTATAAGACTAGTAGGTTCATTTGAGTGGCCTCATGGGCCCAAAACCCTGAGAAGGAGAATCGTCCAAGGAGGGCTCATCCGTGCTGTGAGTGAGAGTTGGTATCCATCTTCTGATGATGACTTTGGTCTCCTACTTGAAGATGACATTGAAGTTTCCCCTTACTACTACCTATGGATCAAATATGCACTCATGGCTTACCACTATGACCCCCAAGTCTCTCTCCCTGAGCTCTCCTCCATTTCCCTCTACACTCCAAAACTCGTTGAAGTTGTCAAAGAGAGGCCAAAATGGAATGCCACAGAATTCTTCAAACGCATCCACCCCAACACACCTTACCTTCACCAACTACCTTGCAGCTGGGGGGCAGTGTTCTTCCCCAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGGATGCCAAGGCCAACCCAGTTCAAATTCCAAAGTCTAGAACAAATGGATGGCAAGCTTCATGGAAGAAGTTCCTCATAGACATGATGTACCTTAGAGGCTATGTTAGTCTCTACCCAAACTTCCCACAACAAGCAAGCTTTTCAACGAACCATATGGAACCAGGGGCACACATTAGTGCAAAAGACAATGTGGTTAAGCACAACAAACAGGACTTTGAGGTGCCACTATTGAAAGAAGACTTTAGAAACTTGTTGCCAGCAATGAAAATGCCTCCAGCATCAAGGCTTCCATCTCTAAACCTCTTCAATCAACCAGTTTCTCTAAAGGCTCTCAAAGCTGCTGGAGCTAAGTTGGGACAGGATGTGCTTAGATGTGACAATGCCACTGAGGTTGTTGCTGTTGATAAAGACACGGGTCTACCTCACACTTGCTCCAAATTCTGA 2841 0.4393 MLEDIESSTQLCKMGFGRNSTSRSGDYLEGMLNDYVGGRNKLKAQKSASTTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPEFTWATKIAQQWKQLMITPHVVGHYQEAASSLIKEDDFPTTPTQVCENEKIDFMQKKSNDVQMIKLKRELYDEVLNFQSKTIGTETLQELMAMKSKWDLKGPNRPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHVWVLSFGSPNEASLRRIVDTYNDSRISFISSNYDFKYYGRFQMALQTEADLVYVVDDDMIPGRKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFIETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDVVQVRDDQWWKALSTGYVTQWAAMYPQKIDALFYAHSVDEVKVLAPLLEKFRSTVGKKAYIVVSGGSFCPCEDAATALKWPALVCKERRFKIFDLAIEALSGVSDSEAPVIHAVYTSVKGLIKIHNPSVVISVAEIDPHVRKALKMASETNSNGTTLVLLPRASVSQVLWMADLRSTALPNWNRMRVSVNIITQNRANSLARLLKSLSNAYYLGDEIPITFNMDSKVDEATIRLVGSFEWPHGPKTLRRRIVQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPKLVEVVKERPKWNATEFFKRIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKANPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNVVKHNKQDFEVPLLKEDFRNLLPAMKMPPASRLPSLNLFNQPVSLKALKAAGAKLGQDVLRCDNATEVVAVDKDTGLPHTCSKF 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01448 946 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 613 861 IPR029044 -
Pumo11g01448 946 CDD Glyco_tranf_GTA_type 202 293 - -
Pumo11g01448 946 SUPERFAMILY Nucleotide-diphospho-sugar transferases 610 802 IPR029044 -
Pumo11g01448 946 PANTHER OSJNBA0004B13.7 PROTEIN 294 937 - -
Pumo11g01448 946 SUPERFAMILY Nucleotide-diphospho-sugar transferases 189 390 IPR029044 -
Pumo11g01448 946 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 175 399 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01448 Pumo-Chr11 44964943 44970281 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01448 - - gsj:114374559 1845.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01448 11 44964943 44970281 Pumo11g01448 11 44964943 44970281 ECH