Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01416 ATGTTGATGTTGCAGAAAAAGAAGAATGGTGGTGGAAACGGCAGCAACAAGGAGAACGAAGACAGCACCATCACCGTCGTCTTAAAGGTCGAAATGCACTGCGACGGTTGTGCTTCCAAAATCATCAAACACCTTCGCGGTTTCCAAGGTGTGGAGACGGTAAAGGCGGAGAGCGACGCCGGGAAGGTAACCGTGACCGGAAAAGTGGACCCCACGAAAGTGAGGGACAAACTGGCGGAGAAGATAAGGAAGAAGGTGGAACTGGTCTCTCCGCAGCCCAAGAACGAGAAGGAGAACAAGGAAACAAAACCCAACAATAAACCCGAGAACAAAACCCAGGACAAAAAAACCAAGGACAAAGAGGTGGTGACTACAGCGGTTCTGAAGGTGGCACTGCATTGCCAGGGGTGCTCGGACAGGATTGGCAAGACTGTGTTGAAAACCAAAGGAGTACAAGAAATGGCCATCGACAAGGAAAAGGAAATGGTGACTGTGAAAGGGACAATGGATGTTAAGGCTCTTGCAGAGAATCTCATGGAGAAGCTTAAGAGGAAGGTTGAGGTGGTTCCTCCCAAGAAAGACAAGGACGGTGACAACAAGGAAGGTGGTGGTGAAAAGGTAGGATCAGGGAAGAAGAAGAACAAGGGTGGTGGTGGAGGAGATAAGGTTGAGAATATTGAAGATGCAATAGAGAAAATAGAGTATAACAGAATGGAGTATTTGGCACAACCTGCTTTTGGCTTTGGTTATGGACCTTATGGTGGTTATGGGCATGGACATGGTGGTGGTGGTTATGGGCATGGCAACATTGGTGGGCATAGCTATGTGCCAGTGTACCCGGAGCAGATGCACTTTCACTTGCATGCACCACCACCACAAATGTTCAGTGATGAGAACCCGAATGCTTGTTCTGTCATGTGA 921 0.4843 MLMLQKKKNGGGNGSNKENEDSTITVVLKVEMHCDGCASKIIKHLRGFQGVETVKAESDAGKVTVTGKVDPTKVRDKLAEKIRKKVELVSPQPKNEKENKETKPNNKPENKTQDKKTKDKEVVTTAVLKVALHCQGCSDRIGKTVLKTKGVQEMAIDKEKEMVTVKGTMDVKALAENLMEKLKRKVEVVPPKKDKDGDNKEGGGEKVGSGKKKNKGGGGGDKVENIEDAIEKIEYNRMEYLAQPAFGFGYGPYGGYGHGHGGGGYGHGNIGGHSYVPVYPEQMHFHLHAPPPQMFSDENPNACSVM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01416 306 Pfam Heavy-metal-associated domain 28 85 IPR006121 GO:0046872
Pumo11g01416 306 Pfam Heavy-metal-associated domain 128 187 IPR006121 GO:0046872
Pumo11g01416 306 MobiDBLite consensus disorder prediction 185 223 - -
Pumo11g01416 306 SUPERFAMILY HMA, heavy metal-associated domain 123 187 IPR036163 GO:0046872
Pumo11g01416 306 ProSiteProfiles Heavy-metal-associated domain profile. 23 94 IPR006121 GO:0046872
Pumo11g01416 306 CDD HMA 27 84 IPR006121 GO:0046872
Pumo11g01416 306 Gene3D - 23 97 - -
Pumo11g01416 306 Gene3D - 120 195 - -
Pumo11g01416 306 ProSiteProfiles Heavy-metal-associated domain profile. 123 194 IPR006121 GO:0046872
Pumo11g01416 306 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 6 306 IPR044594 GO:0046872
Pumo11g01416 306 CDD HMA 127 187 IPR006121 GO:0046872
Pumo11g01416 306 SUPERFAMILY HMA, heavy metal-associated domain 21 86 IPR036163 GO:0046872
Pumo11g01416 306 MobiDBLite consensus disorder prediction 87 120 - -
Pumo11g01416 306 Coils Coil 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01416 Pumo-Chr11 44460129 44462702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01416 - - gsj:114377132 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01416 11 44460129 44462702 Pumo11g01416 11 44460129 44462702 ECH