Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01407 ATGGCTCAGAAAAGACCCCCAAATAGCAGGGGGTACTACGTTAAGATGAAACTCCTTCACAAACATGGCAGACCTCATCATCATCAGCAAGAAAAAAACTGCTTCTATAGATACTACAAATGGGTCCTCTGGCTTTCTCTCTCTCTATATTTCTTCTCTTCCTACCTCATCAGCAACAACCACCACCACGCCAAACAACCATCTCACGTCTCCAGAGCCCTCATCGAATCAAACCACACCACTCCTCCTCAACAAGCTCTCAACTCTCTAGGGTCGTTGAAGAATTTGAAGGTGTTTGTCTACGATCTTCCTCCGAAGTACAACACGGATTGGTTGACAAACGAACGGTGCAGCAAACATTTGTTTGCGTCGGAGGTTGCAATTCACAGGGCACTGTTGACCAGCGACGTGCGCACGTTTGACCCTTACGAAGCAGACTTTTTCTTCGTCCCCGTTTACGTCTCTTGCAACTTCAGCACCGTGAACGGCTTCCCCGCGATTGGCCACGCTCGCTCCCTCATCGCGTCCGCGGTCAGCCTCATCTCCTCGGAGTACCCCTTCTGGAACCGGAGCAGAGGCTCCGACCACGTCTTTGTCGCGTCACACGATTTCGGCTCTTGTTTCCACACCCTGGAGGACGTGGCGATGGCTGATGGCGTGCCAGAAATTATGAGGAACTCGATCGTGTTACAGACGTTTGGCGTTGACTACGATCACCCGTGCCAGAAGGTCGAGCACGTAGTCATTCCGCCGTACGTTTCGCCGGAAAGTGTACGGGACACGATGGAGAATTTTCCGTTGAACGGACGGCGTGATATTTGGGCTTTCTTCCGAGGGAAAATGGAAGTCCATCCCAAGAACGTTAGTGGAAGATTTTACAGCAAGAAAGTGCGGACGGTGATATGGAGGAAGTTGAACGGTGACCGGAGGTTTTACCTGCAGAGGCATAGGTTTGCCGGTTACCAGTCGGAGATTGCACGTTCGGTGTTTTGTTTATGTCCTTTGGGGTGGGCCCCATGGAGTCCGAGGCTGGTCGAGTCCGTTGCCTTGGGCTGCGTGCCGGTTGTTATAGCGGACGGTATCCGGTTGCCGTTTCTCTCCGCCGTGAAGTGGTCGGAGATATTGGTCACGGTGGCTGAGAAGGACGTGGGGAGGCTGGCGGAGATACTCGAGCGCGTGGCGGCGACAAACCTCAGCACCATTCAAAGGAACCTGTGGGACTCAGCGACGAGGAAGGCCCTACTATTCAACAGCCAGGTCCATGAAGGGGATGCCACGTGGCAGGTCCTAAGAGCTTTGAGTGAAAAGCTTGACAGGTCCTATAGAAGCTCGAGGGTTTCACGCCAATTGGATTTTGACACGTAA 1365 0.5282 MAQKRPPNSRGYYVKMKLLHKHGRPHHHQQEKNCFYRYYKWVLWLSLSLYFFSSYLISNNHHHAKQPSHVSRALIESNHTTPPQQALNSLGSLKNLKVFVYDLPPKYNTDWLTNERCSKHLFASEVAIHRALLTSDVRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGHARSLIASAVSLISSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMADGVPEIMRNSIVLQTFGVDYDHPCQKVEHVVIPPYVSPESVRDTMENFPLNGRRDIWAFFRGKMEVHPKNVSGRFYSKKVRTVIWRKLNGDRRFYLQRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFLSAVKWSEILVTVAEKDVGRLAEILERVAATNLSTIQRNLWDSATRKALLFNSQVHEGDATWQVLRALSEKLDRSYRSSRVSRQLDFDT 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01407 454 Pfam Exostosin family 94 392 IPR040911 -
Pumo11g01407 454 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 72 414 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01407 Pumo-Chr11 44291231 44294046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01407 K20889 - gmx:100782077 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03831 4 78553629 78556473 Pumo11g01407 11 44291231 44294046 PCT