Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01395 ATGGCGTCCAACGCTGTCGTTTCACCGTCGCCGTTTAATCCTCTTCTCCGGTCATCCTTCTCCGGCGTCTCCGTCAAGCTCACTCCCCAATCCCTAACCCTTCCACGCTCGAAAACCCTCACCGTCGTCGTCGCCGCCACCAAGAAGGCCGTCGCCGTTCCTCAAGGGTACCTCCGCCGTCGAAGGCGTCGCCACTCTCATCCAAGAAGACGACGTAGGCCCGACGACAGTTTCTGTTCGCATTACTGGCCTTACTCCAGGGCTTCATGGTTTTCACCTAGAGCACATTTTAATCCTAATAACTTGACACATGGTGCTCCTGAGGATGAAGTCCGTCATGCAGGTGACCTGGGAAACATAGTTGCTAATGCAGAGGGGGTTGCAGAGGCTACAATTGTGGATAATCAGATACCACTCTCTGGCTCGAATTCAGTAGTTGGAAGAGCTTTGGTGGTTCATGAGCTTGAGGATGACCTTGGAAAGGGTGGGCATGAACTCAGTTTGACAACTGGCAATGCTGGTGGAAGATTAGCATGTGGTGTGGTTGGTTTGACTCCAGCATAA 564 0.5266 MASNAVVSPSPFNPLLRSSFSGVSVKLTPQSLTLPRSKTLTVVVAATKKAVAVPQGYLRRRRRRHSHPRRRRRPDDSFCSHYWPYSRASWFSPRAHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGSNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPA 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01395 187 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 95 184 IPR024134 GO:0005507
Pumo11g01395 187 Gene3D Superoxide dismutase, copper/zinc binding domain 75 186 IPR036423 GO:0006801|GO:0046872
Pumo11g01395 187 CDD Cu-Zn_Superoxide_Dismutase 96 179 IPR001424 GO:0006801|GO:0046872
Pumo11g01395 187 SUPERFAMILY Cu,Zn superoxide dismutase-like 84 184 IPR036423 GO:0006801|GO:0046872
Pumo11g01395 187 MobiDBLite consensus disorder prediction 56 71 - -
Pumo11g01395 187 ProSitePatterns Copper/Zinc superoxide dismutase signature 2. 171 182 IPR018152 -
Pumo11g01395 187 Pfam Copper/zinc superoxide dismutase (SODC) 94 182 IPR001424 GO:0006801|GO:0046872
Pumo11g01395 187 PRINTS Cu-Zn-superoxide dismutase family signature 132 154 IPR001424 GO:0006801|GO:0046872
Pumo11g01395 187 PRINTS Cu-Zn-superoxide dismutase family signature 157 183 IPR001424 GO:0006801|GO:0046872
Pumo11g01395 187 PRINTS Cu-Zn-superoxide dismutase family signature 113 122 IPR001424 GO:0006801|GO:0046872
Pumo11g01395 187 PRINTS Cu-Zn-superoxide dismutase family signature 77 99 IPR001424 GO:0006801|GO:0046872
Pumo11g01395 187 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01395 Pumo-Chr11 44188980 44192616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01395 K04565 - gmx:100815376 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01395 11 44188980 44192616 Pumo11g01395 11 44188980 44192616 ECH