Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01391 ATGGCACTCCCTCACTCTGCCTTAGCCACCACAGTCACACTTTCCTCCCCAATAAGCAAACCCCACAAAGTGAACCCCTTTCCCTTTTTCTCGAACCAGAATTCACAATTTTTAACGAAACAAACGCGACCCAGAAGCAGAAGAAACCTTTCCCTAACCCCTGCACGCGTTGCGGCGCCACCCTCAACAGTTGAAACCGATCAATCATTCCCAGAGACCGAAAAGGGGGAAACTGAGGAAGAGTTTAACGACGAGAGCTCTTCCTCTAAGTTCTCTTGGAGGGATCACTGGTACCCCGTTTCGTTAATTGAAGATCTGAACCCTCTCTTGCCCACACCGTTTCAGCTTCTCGGTCGTGAAATCGTGCTCTGGTACGACAAGTCCATTTCCCAATGGGTTGCTTTTGATGATAAATGCCCCCATCGTCTTGCCCCTTTATCTGAAGGAAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTACCATGGATGGTCTTTTGATGGTTGTGGATCTTGTGTTAGGATTCCTCAGGCTGCATCTGAAGGTCCCGAAGCACGTGCTATTCGATCTCCTAAAGCGTGTGCCACTAGGTTCCCTACCATGGTGTCTCAGGGCTTGCTCTTTGTATGGCCTGATGAGAATGGTTGGGAGAAAGCAAAGGCCTCCAAGCCTCCAATGTTGCCTGATGACTTTGACAAACCGGAGTTTGCCACGGTCAACATTCAGCGTGATCTGTTCTATGGTTATGATACTCTCATGGAGAATGTCTCTGATCCTTCTCACATTGAATTTGCTCATCACAAGGTCACAGGAAGGAGAGATAGAGCCAAGCCTCTGCCATTCACGATGGATTCTCGTGGTTCATGGGGCTTCTCTGGAGCTAATGAAGGGAACCCACGGATCAGTGCCAAGTTTGTTGCACCATGCTATATGATGAACAAGATTGAGATTGATGCCAAACTCCCTGGAGTTGGTGACCAGAAATGGGTAGTATGGATATGTTCCTTCAACATCCCCATGGCACCTGGTAAGACTCGCTCCATTGTTTGCAGTGCTCGAAACTTCTTCCAGTTCTCAGTGCCAGGGCCTGCCTGGTGGCAAGTCGTTCCTAGATGGTATGAGCATTGGACTTCAAACAAGGTATATGATGGAGACATGATTGTCCTTCAAGGCCAAGAGAAAATCTTCCTTGCAGAAACCAAGGACGGCGGTGACATCAACAAACAGTACGCAAACATCACCTTCACACCAACACAGGCAGATCGCTTTGTCTTGGCATTTCGAAACTGGCTGAGGCGACACGGCGATGGCCAACCAGAATGGTTTGGCAACAGCAGCGACCAGCCACTGCCATCAACTGTTTTATCAAAACGTCAGATGTTGGATAGATTTGAACAGCACACTCTCAAGTGTTCATCATGTAAAGCAGCATATGAGGGATTCCAAACATGGCAGAAAATCCTAATTGGTGCAACAGTTGTGTTTTGTGCAACATCAGGGATCCCATCAGATGTCCAGTTGCGTGTACTCTTGGCTGGACTCGCAATTGTCAGCGCAGCCATAGCTTTTACCCTAAACCAACTCCAAAAGAATTTTGAATTCGTGGATTACGTGCATGCCGAAATCGATTAA 1632 0.4773 MALPHSALATTVTLSSPISKPHKVNPFPFFSNQNSQFLTKQTRPRSRRNLSLTPARVAAPPSTVETDQSFPETEKGETEEEFNDESSSSKFSWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVRIPQAASEGPEARAIRSPKACATRFPTMVSQGLLFVWPDENGWEKAKASKPPMLPDDFDKPEFATVNIQRDLFYGYDTLMENVSDPSHIEFAHHKVTGRRDRAKPLPFTMDSRGSWGFSGANEGNPRISAKFVAPCYMMNKIEIDAKLPGVGDQKWVVWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLAETKDGGDINKQYANITFTPTQADRFVLAFRNWLRRHGDGQPEWFGNSSDQPLPSTVLSKRQMLDRFEQHTLKCSSCKAAYEGFQTWQKILIGATVVFCATSGIPSDVQLRVLLAGLAIVSAAIAFTLNQLQKNFEFVDYVHAEID 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01391 543 Pfam Rieske [2Fe-2S] domain 96 179 IPR017941 GO:0051537
Pumo11g01391 543 Gene3D - 92 234 IPR036922 GO:0051537
Pumo11g01391 543 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 28 489 - -
Pumo11g01391 543 MobiDBLite consensus disorder prediction 70 87 - -
Pumo11g01391 543 Gene3D - 235 438 - -
Pumo11g01391 543 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 97 209 IPR017941 GO:0051537
Pumo11g01391 543 MobiDBLite consensus disorder prediction 38 87 - -
Pumo11g01391 543 CDD Rieske_RO_Alpha_PaO 85 219 - -
Pumo11g01391 543 Pfam Pheophorbide a oxygenase 305 399 IPR013626 GO:0010277
Pumo11g01391 543 SUPERFAMILY ISP domain 90 215 IPR036922 GO:0051537
Pumo11g01391 543 SUPERFAMILY Bet v1-like 204 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01391 Pumo-Chr11 44150287 44155336 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01391 K13071 - gmx:100812162 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01391 11 44150287 44155336 Pumo11g01391 11 44150287 44155336 ECH