Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01378 ATGGAAAAGGTCCCTTGTTTTGTCTCCATTCTCCTATTCATTGCTCTACTATTTCATGGAGGAAAGGTGTTAGCTTTCAAGAGCCAAGACGGATCAGAGGAATGGGGATACGTTCAAGTTAGACCCAAAGCGCACATGTTTTGGTGGCTCTACAGAAGTCCCTATAGAGTGGAAGATTCTTCTAAGCCATGGCCAATTATTCTCTGGTTGCAAGGAGGACCTGGTGCTTCAGGAGTTGGGATTGGAAATTTTGAGGAGATTGGGCCTTTGGACACAAGCTTGAAGCCAAGGAATTCCACATGGTTGAGAAAAGCAGATCTCTTGTTTGTGGACAATCCAGTTGGAACCGGGTACAGTTTTGTGGAGGATAAAAAACTCTTTGTGAAAACAGATGATGAAGCAGCCACCGACTTGACTACATTGCTGATTGAATTATTCAATAGGGATGAGAAACTACAAAAGAGCCCCCTGTTCATCGTGGCAGAGTCATATGGTGGCAAATTTGCTGTCACTGTTGGGTTATCTGCTCTGAAAGCTATAGAAGATGGGAAATTGAAGCTTAGACTTGGAGGTGTGGCATTAGGAGACAGTTGGATCTCCCCGGAAGATTTTGTGTTTTCATGGGGTCCTCTCCTTAAAGACCTCTCACGACTTGACGATAATGGACTGCAAAAATCAAACAGTATAGCTGAGAGGATCAAGCAGCAACTTGTGGATGGTAAATTTGTTGAAGCCACCGACTCATGGAGTGAACTTGAGAATGTGATTGCCAGGAGCAGCAACAATGTGGACTTCTACAATTTATTGGAGGATGCGGGAGGTGATGACATAGCAGCAATGGAGTTGGGGTTATATGAAAAAGTATCAATGAAGAGGTATTCCAGGTATCTTACTTCCATGAGGTCAAGGTCAACTCCTGGTGGTGATGATGATCTTGACACGTTACTAAACGGTGTCATAAAGAAAAAGTTAAAGATCATCCCTGAGAATGTCACATGGGGAGGGCAGTCTGACTATGTTTTCAACTATCTTGCGGGTGATTTTATGAGACCAAGAATTAATGAGGTTGATGAACTGCTGACAAAAGGGGTCAATGTGACTGTGTACAATGGACAAGTTGATCTGATTTGTTCAACCAAAGGGACTGAAGCTTGGGTTCATAAATTGAAGTGGGAAGGGCTTAAAAATTTCTTGGCGAAAGATAGAACACCTCTCTACTGCGGAAGTGACAAATCGACAACCAAAGGCTTTGTTAAGTCATATAAAAACCTATACTTCTATTGGATCCTCAAAGCTGGCCATTTTGTACCCACTGATCAGCCATGCGTGGCACTAGGCATGGTGGGTGCAATTACACAGTCACCAGCCACTTGA 1374 0.4338 MEKVPCFVSILLFIALLFHGGKVLAFKSQDGSEEWGYVQVRPKAHMFWWLYRSPYRVEDSSKPWPIILWLQGGPGASGVGIGNFEEIGPLDTSLKPRNSTWLRKADLLFVDNPVGTGYSFVEDKKLFVKTDDEAATDLTTLLIELFNRDEKLQKSPLFIVAESYGGKFAVTVGLSALKAIEDGKLKLRLGGVALGDSWISPEDFVFSWGPLLKDLSRLDDNGLQKSNSIAERIKQQLVDGKFVEATDSWSELENVIARSSNNVDFYNLLEDAGGDDIAAMELGLYEKVSMKRYSRYLTSMRSRSTPGGDDDLDTLLNGVIKKKLKIIPENVTWGGQSDYVFNYLAGDFMRPRINEVDELLTKGVNVTVYNGQVDLICSTKGTEAWVHKLKWEGLKNFLAKDRTPLYCGSDKSTTKGFVKSYKNLYFYWILKAGHFVPTDQPCVALGMVGAITQSPAT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01378 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 441 IPR001563 GO:0004185|GO:0006508
Pumo11g01378 457 FunFam Carboxypeptidase 18 456 - -
Pumo11g01378 457 Gene3D alpha/beta hydrolase 19 456 IPR029058 -
Pumo11g01378 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Pumo11g01378 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Pumo11g01378 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Pumo11g01378 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Pumo11g01378 457 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Pumo11g01378 457 Pfam Serine carboxypeptidase 30 450 IPR001563 GO:0004185|GO:0006508
Pumo11g01378 457 SUPERFAMILY alpha/beta-Hydrolases 25 454 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01378 Pumo-Chr11 43918102 43923199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01378 K09646 - gmx:100808412 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01378 11 43918102 43923199 Pumo11g01378 11 43918102 43923199 ECH