Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01377 ATGCAGCCGAATTTGTTTCCCTTTGGAAGCGTGCTGGGGAATCCGTTCATTTTCAATGGCGAGGATTTGAGCGAGAGAGGGATTGAGAGCTCTAGGGTTTTCTTCTTGCTCCCGTTCTTCTTGCTCTCCCAGGGAGGAGCAATGGATTTGTCCAAGGTCGGCGAAAAAATCTTGAGCTCCGTTAGGTCCGCGAGATCTCTCGGATTGCTACCGCCCGTTTCTGATCGCCCCGAGGTTCCAGCTCGAGCTGCTGCTGCTGCTGCTGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGATACAGTTTTTCGTCAAGTTCAGAAGAACTGAGTTCAATATATGGAGGCAGACCTCAAGGCCAAGTAGTGGAGGAGCTGGAGGATGAATTCTATGAAGAGGACTTTGATCCAATTAGGCATGTTTTAGAGCACGTACCAGTTGAAGAAAATGAGCTAACATATTTTGAAAAACAGGCTGCCCTTAGATTGGCCCAACTGGATAGAGTAGCTGAGCGTTTATCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGAGAATTGGAAAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGAAGAAGACACTTGACATCATCTATGAATGAGGTTTCAAGGGATCTGATTGTGAATTCTTATTCTAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAACCTTGACTGAACTTCAACGTGCTTTGGACATGCAATCAACACTTGAATCCCTTGTAGAGGAAGGGAATTACTGGAAGGCATTTCAAGTCCTATCTGAGTATTTGCAACTCTTAGATAGTTTGTCAGAGCTTTCAGCAATACAAGAAATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAGAACTTTACAGAAGCTGGATGCTCTTTTATTGGGAGTATGTCAAGAATTCAAGGAAGATGGCTATATAACAGTAATTGATGCATATGCATTAATTGGGGATACTGCTGGTCTTGCTGAAAAGATACAAAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACTCTGTATTAAAGGCCATTGTGCATGAGGATGAGGAGGGACTTGCGCAAAATAGTAGGCTCACTTACAGCGATCTATGCCTTCGAATACCTGATTCAAAGTTCAGGCAATGCTTATTACGAACATTGGCTGTTTTATTTGACCTTATGTGTTCATACCATGAAATTATGGATTTCCAGCTAGAAAGAAAGGACTCAGCAGCACAAACTTCAAATAAGTGCAATGAAGAGATTTCCTGTAGACCAGGTGAGGCTCAGGAAGTTGATTCAGATGTAAGAGCCTGCAACAATTCTATGTCCAGTTCCGGAGATGTAATACATGGCTCATCTTCTAGGGAGGAGTCTGCAACAATGAGCTCACTGACTGAAACCAGTGGTTCACCATACAGTGATTCTCATGATCCAATTAAGGAGGTTGGAAAGGAGGACAGTGCAACATCAAGCATTGAGTCCCCTTGGTACCATCTTCGCAAAGAAGCTACAACATTTGTTTCACAGACCCTTCAAAGAGGACGCAGGAATCTGTGGCATCTCACTGCAAGTCGTGTATCAGTATTGCTTTCTGCTGCTGCAGCATGTACTGCTAGCATTCATCAATTCTTGAAAAATTATGAAGATCTCAGTGTCTTTATTTTGACTGGGGAAGCATTTTGTGGAATTGAAGCAGTTGAATTTAGGCAGAAGTTAAAGGTTGTTTGTGAAAATTATTTCATAGCTTTTCATCGACAAAATGTGCATGCACTGAAAATGGTTTTGGAGAAAGAGACTTGGCTAAAATTACCTCCAGAAACAGTACAAATTATCAGTTTTGCAGGACTTATCGGTGATGGAGCACCGTTGATTTCTTTATCCAGCGGTAAATCAACTAATGTCAGTGCAATCCATTCCATTAAATCGGTGAATATGGTTCACACTGGTGCAAGGAAGAATGGGTTTTCTCACTGGATTAAAAGTGGAAACCCTTTCCAGCAAAAATTACCAACCTCCAGTGAAGGTCATGGTTACTCACAACCTAATGGATCAGTTTGTGGTGAATTTGATGGAAGTTCAACCAATAATTTTCATGATGATAAAACACCCAGAAAGAATGATGTCAATCAAATGAATGGTGCCAATTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGTCAACTACCAAGTCGAAGTTCTAAACCCCATCATTCAAGAACTCTCTCTTCACATGGTTATGACGAAGAGAATACAACACAAACTGGATCTTCTCTCTGTCTTTTAAAGTCTATGGATAAATATGCAAGGCTCATGCAGAAATTGGAAGTGGTAAATGTTGAGTTCTTCAAGGGAATATGCCAATTGTTTGGAATTTTTTTCTATTTTATATATGAAACATTTGGTCAGCAAAACACTAGTTCAACTGGAAAAAGCTCAACTAGCTCTCTTAATTATCGCTTGAGAACAGCTTTATCCAGAGTAAACCAAGATTGTGAAGAGTGGATTAAGTCTCAATCGTCTTCACCAACATCTTTGAGTTCATCATTTGCACATGCTGAGTTGACACCTACACACCCTCCCAATACGAATTTTGGTCACTCCTCAGGGACTTCTTTGGGTCTCAAGGAAAGATGCGTGGCTGTTGACACTATATCTCTTGTTGCTCGAATACTGAATAGATCTAAAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTATACTCGAGGATTTCTATGTTCATCTGGTGGATGCTGTACCAGATCTTACAGAACATGTTCATCGGACTACAGTGAGACTACTTTTGCACATTAATGGATATGTTGAACGTGTTGCCAATTGTAAATGGGAAGTAAAAGAGCTTGGCATGGAGCATAATGGATATGTTGATTTGTTGCTGGGGGAGTTTAAGCACTATAAAACACGACTTGCTCATGGAGGGATTCGTAAAGAGACTCAAGACCTATTATTGGATTATGGGCTTGAAATTGTGGCGGAAACTCTTGTTGAAGGACTTTCACGGGTGAAGAGATGTAGTGATGAAGGACGAGCTCTTATGTCATTAGATCTGCAGGTTTTGATCAATGGATTACAGCATTTTGTGTCGCTGAATGTGAAGCCCAAGCTACAAATGGTTGAAATTTTCATCAAGGCTTACTACCTTCCCGAGACTGAATATGTGCACTGGGCACGAGCACACCCGGAATACAGTAAAAGCCAGATTGTTGGTCTGGTCAACCTTGTTGCCACTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGATATACTGGAAAAGATTGAATGA 3366 0.4124 MQPNLFPFGSVLGNPFIFNGEDLSERGIESSRVFFLLPFFLLSQGGAMDLSKVGEKILSSVRSARSLGLLPPVSDRPEVPARAAAAAAVARALAGLPPHQRYSFSSSSEELSSIYGGRPQGQVVEELEDEFYEEDFDPIRHVLEHVPVEENELTYFEKQAALRLAQLDRVAERLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPTLTELQRALDMQSTLESLVEEGNYWKAFQVLSEYLQLLDSLSELSAIQEMSRGVEVWLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKAIVHEDEEGLAQNSRLTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMDFQLERKDSAAQTSNKCNEEISCRPGEAQEVDSDVRACNNSMSSSGDVIHGSSSREESATMSSLTETSGSPYSDSHDPIKEVGKEDSATSSIESPWYHLRKEATTFVSQTLQRGRRNLWHLTASRVSVLLSAAAACTASIHQFLKNYEDLSVFILTGEAFCGIEAVEFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLKLPPETVQIISFAGLIGDGAPLISLSSGKSTNVSAIHSIKSVNMVHTGARKNGFSHWIKSGNPFQQKLPTSSEGHGYSQPNGSVCGEFDGSSTNNFHDDKTPRKNDVNQMNGANSVSEDENEDLLADFIDEDSQLPSRSSKPHHSRTLSSHGYDEENTTQTGSSLCLLKSMDKYARLMQKLEVVNVEFFKGICQLFGIFFYFIYETFGQQNTSSTGKSSTSSLNYRLRTALSRVNQDCEEWIKSQSSSPTSLSSSFAHAELTPTHPPNTNFGHSSGTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTILEDFYVHLVDAVPDLTEHVHRTTVRLLLHINGYVERVANCKWEVKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRKETQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVSLNVKPKLQMVEIFIKAYYLPETEYVHWARAHPEYSKSQIVGLVNLVATMKGWKRKTRLDILEKIE 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01377 1121 Pfam Protein of unknown function C-terminus (DUF2451) 891 1121 IPR019514 -
Pumo11g01377 1121 MobiDBLite consensus disorder prediction 857 885 - -
Pumo11g01377 1121 MobiDBLite consensus disorder prediction 452 485 - -
Pumo11g01377 1121 Pfam Vacuolar-sorting protein 54, of GARP complex 124 413 IPR019515 -
Pumo11g01377 1121 MobiDBLite consensus disorder prediction 745 771 - -
Pumo11g01377 1121 MobiDBLite consensus disorder prediction 674 730 - -
Pumo11g01377 1121 MobiDBLite consensus disorder prediction 674 704 - -
Pumo11g01377 1121 PANTHER UNCHARACTERIZED 48 1121 IPR040047 GO:0032456|GO:0042147|GO:1990745
Pumo11g01377 1121 MobiDBLite consensus disorder prediction 452 498 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01377 K23288 - gmx:100788476 2069.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01377 11 43892987 43911913 Pumo11g01377 11 43892987 43911913 ECH