Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01354 ATGTTTTTGGTGGTAAGACCATGTTGTTCTTCCGTGCGTATTCATCATCATTATCTGCAGTTGCACCCCACGCCGCACCGTAGCAGCAGAAACGTCGTCGTTAGATGCTCCCTGAGCAGCGTGCAGGAGAAAGAAGAGAAGAAGGGTACTGAATTGGATTCGGAGCTGTCATTCCCTCCGATCAGGGCGGCGAAGAGGGTGGTTCTGGTGAGGCACGGGCAGAGCACGTGGAACGCCGAAGGCAGGATCCAAGGAAGTTCCAATTTCTCGGTTCTCACCAAGAAGGGCGAGTCTCAGGCCGAGACTTCGCGCCAAATGCTCATCGACGACAACTTCGATGCCTGCTTTGCTAGTCCTTTGGCTCGATCCAAGAGAACTGCTGAAATCATTTGGGGACCTCGCCAGGAATCCATCATTCCCGACTATGATTTGAGGGAAATCGATTTGTACTCCTTTCAAGGTCTGTTGAAGCATGAAGGGAAAGAGAGATTTGGTTCTGCTTATCACCAATGGCAGGTGGATGCTGCAAATTTCATCATTGATGGTCATTATCCTGTTAGAGAGCTGTGGGAACGTGCTAGAAGCTGCTGGACTAAAATCTTAGATCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCCCTTGTTGCCACAGCAATTGGTTTGGGGGCCGAGTATTTCAGAACATTACTTCAGAGCAATTGTGGTGTTAGTGTGCTGGATTTCATCCCGAGATCTGAGGGTGGGTCTCCACATATTTGCCTTAACCGCTTAAATCAGACCCCTGGTTCACCTATTGCTGGTGGGAAATCTGGAGGTAGAGAGACAAGTAAGCGGATCATACTTGTTTGTAATGGATCAACACAAGGAAATACAGAGGATGTTTTTCCTTTTGCCGGTGATCAACCATTGAACATGCTTGGTGTCATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAATTCCATAATTAGCAGTCCTAGCAAAGCTTGTGTTGGAACAGCCACGACCATCTCCCAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCTCGATATGTTGAGATGAAGCAGATGGGGAACCTTGATGTTGAATCTATCTTCAAACAATCCGAAATGGATATATCCAATTTTCCACCATTTCAACCTGGGTGGTTAAATAGAGTTGACGATGGATTGAGAACAACATTATGGGATCAATCTGGAAAAGCCTGGCAATCCCTGTTGGATGAAATATTTGATGAATCTAACCCAGAAGTTGTAGTTGCAGTTGGTCATCCTGCAATCCACATAGCACTAATGGGGCACTGCCTTAATTTGACGAAAGAATGGTTGGGATCATTTCATCTTGACGCAGGGAGCGTTAGTGTTGTTGACTTCCCTGATGGACCTAAGGGAAAAGGTGTCATCAGGTGCATAAATTACACTGCACATTTGGGGAGATGGTCCATACCTATTACAAGATCAACAGAGGATGGTGAAGAGTTTTAA 1527 0.4623 MFLVVRPCCSSVRIHHHYLQLHPTPHRSSRNVVVRCSLSSVQEKEEKKGTELDSELSFPPIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDNFDACFASPLARSKRTAEIIWGPRQESIIPDYDLREIDLYSFQGLLKHEGKERFGSAYHQWQVDAANFIIDGHYPVRELWERARSCWTKILDHDSRSVLVVAHNAVNQALVATAIGLGAEYFRTLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPIAGGKSGGRETSKRIILVCNGSTQGNTEDVFPFAGDQPLNMLGVIQSQKSAELLLDLKVNSIISSPSKACVGTATTISQVQEAADCLGADCVPRYVEMKQMGNLDVESIFKQSEMDISNFPPFQPGWLNRVDDGLRTTLWDQSGKAWQSLLDEIFDESNPEVVVAVGHPAIHIALMGHCLNLTKEWLGSFHLDAGSVSVVDFPDGPKGKGVIRCINYTAHLGRWSIPITRSTEDGEEF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01354 508 SUPERFAMILY Phosphoglycerate mutase-like 282 496 IPR029033 -
Pumo11g01354 508 Pfam Histidine phosphatase superfamily (branch 1) 67 248 IPR013078 -
Pumo11g01354 508 Pfam Histidine phosphatase superfamily (branch 1) 285 475 IPR013078 -
Pumo11g01354 508 Gene3D - 277 495 IPR029033 -
Pumo11g01354 508 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 69 78 IPR001345 GO:0003824
Pumo11g01354 508 FunFam Phosphoglycerate mutase 65 269 - -
Pumo11g01354 508 Gene3D - 65 252 IPR029033 -
Pumo11g01354 508 SUPERFAMILY Phosphoglycerate mutase-like 65 261 IPR029033 -
Pumo11g01354 508 CDD HP_PGM_like 66 247 IPR013078 -
Pumo11g01354 508 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 276 495 - -
Pumo11g01354 508 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 280 475 - -
Pumo11g01354 508 SMART PGAM_5 284 445 IPR013078 -
Pumo11g01354 508 SMART PGAM_5 66 220 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01354 Pumo-Chr11 43507384 43512333 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01354 K22200 - gmx:100798495 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01354 11 43507384 43512333 Pumo11g01354 11 43507384 43512333 ECH