Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01331 ATGGAGTTGGGAAGTGTTCACGACTTTCTTAAGGGAAAAACCATTTTAGTTACCGGTGGAACGGGATTCTTAGCAAAACTTTTCGTGGAGAAGATATTAAGGGTTCAACCAAACATCAAAAAGTTGTACCTTCTTCTAAGAGCGCCAAATCCTCATATAGCTACCCAACGCTTCCACGATGAGGTTATTGGGAAGGACTTGTTCAGGGTGCTACGAGAAATGTGGGGTGCAGATTTTGAGTCCTTCATATTCGAGAAAGTGTTGGCTGTTGGTGGCGATGTTTCTCTTGAGAATTTGGGAGTTGAAGACTTGGTGCTGAGGAAAAAGATGTGGGAAGAGATAGACATCATAGTACACGCTGCTGCTGCTACCAAGTTTGACGAGAGATTCGATATTGCAATGGGCATTAATACGATGGGAGCTGTTCATGTTCTGAACTTCGCCAAGAACTGTGGTAAAATACAAATTCTTCTCCACATATCTACTGCTTACGTATGCGGTGAGGCAAAAGGATTAGTACCTGAGGAACCTTTTCACATGGGTCAGACCCTAAATGGGTCCTCAACATTAGACATCAACATAGAAAAACTATTAATTGAGGAAAAAATGAAGGAACTCCGGGCACAAAATGCTAGTGAACAAACAATCACATCGGTGATGAAAAACTTGGGAAATAAAAGGGCAAATTTACATGGTTGGCCCAATGCCTATGTATTTACAAAAGCGATGGGAGAGATGGTTTTGTTCAATATGAAAGGTGATGTACCTTTGATCATCGCACGCCCCACTACAGTACTCAGCACTCACTCCGAACCATTCCCCGGTTGGATTGAAGGTGTGAGAACTGTTGACCTTTTCGTTGTCATGTTCGGTAAAGGAAAATTAAGAAGATCTGTTGGTCGTCGGAGTACAATTATAGACGCGATACCCGCTGACATGGTGATAAATTCCATGATAATAGCATTAGAGGCTCATTCAAAGAGCTTTTCCAAGACACTGCTTTACCATATTGGTTCTTCATTGAGAAATCCATTCAGAATTTCCGATCTTGAGGATATAGCCTATCAATATTTTACCAAAAATCCTTTGATCAACAAATGTGGAAAACCCGTGGCTATCTCCAAGAAAGTTACGTGGATCTCTAGTACGAGTTCATTTGACAGATATATCAAGATTCGATACGTGCTACCTCTAATGGGATTAAATGTGGTGAGCAAGGTATGTTGCCATCGTTACCAGGATTTTCACCGTGAGAGTCAACGAAAACTCAAAACACTGATGAAAATAACAAGACTTTATAAACCTTATCTCCTCTTTGAGGGCATCTTCGATGACAAGAACGCAGAAAATTTACGGATGGCAAAAAAGCTGGCTGCAGGAGATGATGTTGGAAGATTTAACTTTGATCCCAGCAACATTGATTGGATGGACTATGTGTTAAATGCCCACATTCCTGGACTCGTGAAGTATGGTGTTAAGTAA 1482 0.4109 MELGSVHDFLKGKTILVTGGTGFLAKLFVEKILRVQPNIKKLYLLLRAPNPHIATQRFHDEVIGKDLFRVLREMWGADFESFIFEKVLAVGGDVSLENLGVEDLVLRKKMWEEIDIIVHAAAATKFDERFDIAMGINTMGAVHVLNFAKNCGKIQILLHISTAYVCGEAKGLVPEEPFHMGQTLNGSSTLDINIEKLLIEEKMKELRAQNASEQTITSVMKNLGNKRANLHGWPNAYVFTKAMGEMVLFNMKGDVPLIIARPTTVLSTHSEPFPGWIEGVRTVDLFVVMFGKGKLRRSVGRRSTIIDAIPADMVINSMIIALEAHSKSFSKTLLYHIGSSLRNPFRISDLEDIAYQYFTKNPLINKCGKPVAISKKVTWISSTSSFDRYIKIRYVLPLMGLNVVSKVCCHRYQDFHRESQRKLKTLMKITRLYKPYLLFEGIFDDKNAENLRMAKKLAAGDDVGRFNFDPSNIDWMDYVLNAHIPGLVKYGVK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01331 493 Gene3D - 6 379 - -
Pumo11g01331 493 Pfam Male sterility protein 394 493 IPR033640 -
Pumo11g01331 493 Pfam Male sterility protein 17 318 IPR013120 -
Pumo11g01331 493 CDD FAR_C 392 490 IPR033640 -
Pumo11g01331 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 491 IPR026055 GO:0080019
Pumo11g01331 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 330 IPR036291 -
Pumo11g01331 493 CDD FAR-N_SDR_e 13 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01331 Pumo-Chr11 43230360 43234823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01331 1 443 Acyl Lipid Metabolism Gene Families AT3G44560 49.438 2.26e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01331 K13356 - gmx:100793736 853.203