Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01329 ATGGAATTGGGAAGCATAATTCACTTCCTTGAGGACAAGAACATTTTGGTCATTGGTGCCGCTGGCTTCCTTGCCAAAATTTTTGTGGAGAAGATACTAAGAGTGCAACCAAATGTGAAGAAACTTTATCTTCTTTTGAGAGCCACAGATACTGAATCTGCCTCTCAACGATTGCACAACGAGATTATACAGAAGGACTTGTTTAGATTGTTGAAGGAAAATCTTGGTGCGAAGTTCAATACCTTTGTTTCAGAAAAGTTGAGTCTTGTGCCTGGGGACATTTCTCAAGAGGACTTCAACTTGAAAGACCCCATTCTACGGGAAGAAATCTGCAGTCAAACTCATTGTATAATCAATTTTGCTGCCACAACTAACTTTGATGAAAGATACGATGCTGCATTTGGTATAAATACATTAGGAGTTAAGCATGTTTTGAACTTCGCCAAAAGTTGTATTAAGCTGAAGGTGCTTGTCCACGTATCAACAGCATATGTATGTGGTGAGAGAGGAGGACTCATTGTAGAGGATCCATGCCAATTGGGCGTGTCGCTAAATGGAGTGCCCGGACTAGACATTGACATGGAAAAGAAAGTGATGGAGGATAAGTTGTACCAACTTCAACAAGAGGGAGCTACAGATGATGATATTAAAATGGCAATGAAGGACTTGGGTATGAAAAGAGCAACTATATATGGATGGCCAAACACGTATGTCTTTACAAAGGCAATGGGAGAAATGCTTATAGAAACTCTAAAGGAAAACATGTCCGTTGTTATTGTACGTCCTACAATGGTTACCAGTACTTACAAAGAACCTTTCCCTGGGTGGGTCGAAGGAGTAAGGACCATAGATAGTTTAATTGTTGCTTATGGCAAAGGAAAATTAACATGCTTTCTTGCAGACATCAAGGCAATTTTTGACGTGATACCAGCAGACATGGTGGTGAATGCAATAATAAGTACCATGGTGGCTCATGCAAATAAGCCATGTGATAATATCATATATCATGTAGGTTCCTCTTTTGCAAATCCAGTTAGATACCACAATCTCCAAGACTACGGCTTTAGATACTTCACTGCAAAACCATATGTAAACAAGGAAGGAAACTATGTCATGGTTCGCAAAGTTACAGTGTTGGACAGCATGACTAGCTTTCAAAGATACATGTTCATTCGTTACTTCCTTCCATTAAAGGGACTAGAGCTAGCCAATGCTGCTTTTTGCCAATATTTTCAAAGAATGTATCTTGACGTCAGACGGAAGATCTATACAGTGATGCGGTTGGTTGACCTTTATAGGCCTTACTTGTTCTTCAATGGCGTTTTTGATAACATGAACACAAAAAAGTTGGAAATAGCAGCAAGACAAAGTGGAGTAGAGATGGAGGAGTATTTGTTTTACTTTGACCCGAAAATGATTGATTGGGAGGATTACTTCATGAATATCCATATTCCCGGTATCGTCAAGTATGTCTTCAAGTGA 1482 0.3947 MELGSIIHFLEDKNILVIGAAGFLAKIFVEKILRVQPNVKKLYLLLRATDTESASQRLHNEIIQKDLFRLLKENLGAKFNTFVSEKLSLVPGDISQEDFNLKDPILREEICSQTHCIINFAATTNFDERYDAAFGINTLGVKHVLNFAKSCIKLKVLVHVSTAYVCGERGGLIVEDPCQLGVSLNGVPGLDIDMEKKVMEDKLYQLQQEGATDDDIKMAMKDLGMKRATIYGWPNTYVFTKAMGEMLIETLKENMSVVIVRPTMVTSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLADIKAIFDVIPADMVVNAIISTMVAHANKPCDNIIYHVGSSFANPVRYHNLQDYGFRYFTAKPYVNKEGNYVMVRKVTVLDSMTSFQRYMFIRYFLPLKGLELANAAFCQYFQRMYLDVRRKIYTVMRLVDLYRPYLFFNGVFDNMNTKKLEIAARQSGVEMEEYLFYFDPKMIDWEDYFMNIHIPGIVKYVFK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01329 493 Gene3D - 8 377 - -
Pumo11g01329 493 CDD FAR_C 391 492 IPR033640 -
Pumo11g01329 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 493 IPR026055 GO:0080019
Pumo11g01329 493 Pfam Male sterility protein 392 493 IPR033640 -
Pumo11g01329 493 CDD FAR-N_SDR_e 13 362 - -
Pumo11g01329 493 Pfam Male sterility protein 19 318 IPR013120 -
Pumo11g01329 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 340 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01329 Pumo-Chr11 43200180 43204295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01329 113 492 Acyl Lipid Metabolism Gene Families AT4G33790 58.421 1.43e-168 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01329 K13356 - gmx:100788994 954.896