Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01314 ATGGACCAGCTTCCTGTTGAAGTGATTGGGAACATTCTGTCACACTTGAGGGCTGCACGAGATGTGGTGATAGCCTCTGCAACGTGCAGGAAATGGCGACAAGCGTGCTGCAAGCACCTTCATACACTCTCCTTCAGCTCCAAAGATTGGCCCATTTACCGTGATTTGACGACTACCCGCCTCGAGATTTTGATCACACAAACCATTTTCCAGACCTCAGGGTTGCAGGCCCTCTCCATTTTGATGGAAGATGTGGATGAATTCTCGGCTTCCACCGTTACTGCTTGGCTCTTGTACACCAGGGAAACTCTGAGGCAATTGCATTATAATGTCAAGACTATGCCTAATGTTAACATTCTTGAAATATGTGGCAGGCACAAGCTGGAAATACTAGATCTGGCTCATAATTGCATTGTGGGGGTTGAGCCTAATTATCAGCGGTTCCCTTGTTTGAAATCTCTTTCCCTGAGTTATGTCAGTATATCTGCATTGGATCTGAATCTTTTGGTGTCTGCATGTCCGAAGATTGAAGCCTTGGAACTTGTCAATCCTGAGATTGCAATGTCTGATGCACAGGTGACAGTTGAGTTGAGTAGCTCAACGCTGAAGAGTGTGTATGTAGAAGCAATCAGTTTGGACAAGTTTATGTTGGAGGCTGATGGGCTTGAGTGCTTGCACTTGAAAGATTGTGCACTAGAGTTTTTTGAACTCATTGGCAAGGGGACCTTGAAGCATTTTAAGATTGATGATGTTAGTGTTATACATCTTGATATTGGTGAGACAGTTGAGAATCTTGAGACTCTGGATATCAGCAACTTCACAATTATATGGACAAAGTTTTACCAGATGATTTCAAGATCTTCGAATTTAAAGAGACTTCGGCTTTGGGATGTGATGTTTGACGATGAGGATGAGGTTGTGGATTTGGAAACAATTGCAACTTGCTTTCCCTACCTGAGCCATTTATCTCTTAGTTATGATGTGAGAGATGGAGTGCTTCACTATGGTTTACAAGGCTCTTCCTATCTGGATAATGTTGTTGTCTTGGAGCTTGGCTGGACTGTGATCAATGATCTTTTCTCCCACTGGGTTGAGGGGCTGCTTAAGCGATGCCCCAATCTCAAGAAGTTGGTCATTCATGGGATTGTTTCTGAGGCTAAGTCTCATGAAGAATGCCAGATGTTAGCCAATTTCACCACATCCATGGTTGAGCTGATGAGGAGATACACATATGTAGATCCACATTTTAAGTATGAATAG 1260 0.4333 MDQLPVEVIGNILSHLRAARDVVIASATCRKWRQACCKHLHTLSFSSKDWPIYRDLTTTRLEILITQTIFQTSGLQALSILMEDVDEFSASTVTAWLLYTRETLRQLHYNVKTMPNVNILEICGRHKLEILDLAHNCIVGVEPNYQRFPCLKSLSLSYVSISALDLNLLVSACPKIEALELVNPEIAMSDAQVTVELSSSTLKSVYVEAISLDKFMLEADGLECLHLKDCALEFFELIGKGTLKHFKIDDVSVIHLDIGETVENLETLDISNFTIIWTKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPYLSHLSLSYDVRDGVLHYGLQGSSYLDNVVVLELGWTVINDLFSHWVEGLLKRCPNLKKLVIHGIVSEAKSHEECQMLANFTTSMVELMRRYTYVDPHFKYE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01314 419 CDD F-box_SF 2 37 - -
Pumo11g01314 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Pumo11g01314 419 SUPERFAMILY F-box domain 1 55 IPR036047 GO:0005515
Pumo11g01314 419 Gene3D Ribonuclease Inhibitor 112 398 IPR032675 -
Pumo11g01314 419 Gene3D - 1 44 - -
Pumo11g01314 419 Pfam F-box-like 2 39 IPR001810 GO:0005515
Pumo11g01314 419 PANTHER F-BOX PROTEIN-LIKE 2 382 - -
Pumo11g01314 419 SUPERFAMILY RNI-like 73 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01314 Pumo-Chr11 42959529 42960788 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01314 - - gmx:100786847 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01314 11 42959529 42960788 Pumo11g01314 11 42959529 42960788 ECH