Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01313 ATGGCTACTAAACCCCTTCACCTCATTCTCCTTCTTCTTCTTCTCTGTTATACTCTTGAATTTTCTTCAGCTTCACCCTCCGATCACCTCTACGATGTTGGAGAACTTGTCCCATTGTTTGTCAACAAAGTGGGACCCTTCAACAACCCCAGTGAGACATATGAATACTATGATTTGCCATTCTGCACCCCAGACCCAATTGTCAGAAAGAAAGAGTCCCTAGGGGAAGTTCTCAATGGTGACCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTCCGGGTGGACAAGATTGATGAGACCTTGTGCCAAAAGAAGCTTACAATTGATCAAATTGCAACCTTTAAGCGAGCTATAAACCGCGACTTTTACTTCCAGTTTTACCTGGATGATCTTCCATTTTGGGGGTTCATTGGGAAACTTGAAGAGGATGGATGGACTCCTGGTGGAGGAGGACCAAACTATCACCTTTTTACACATGTTCAATTTGATGTTCTTTACAATGGGAACCGGATCATACAAGTAAATGCATTTGGCGATCCAAATCATGCTGTAGATATTACTAAAGATATTGGTGTTGATGTTAAGTTCACTTATTCTGTTATCTGGAATGCCACTAAAGTACGTTTTGAGAACAGGATGGACAGATACTCGAGAGCTTCGTTGATGCCTGTGCATCAGCAAGTTCATTGGTTCTCATTCATCAACTCAATTGTCATCATTTTGCTTTTGATTGGTTTGCTTGCCCTGCTTTACATGCGGCATCTGAGGAGTGATTTGAAAAAGTATTCTAATGCAAATGAAGAAGATAATGAGGTTGGTTGGAAGTCCCTCCAACATGGCGATGTATTCAGACCTCCTCCAAACTCATCCTTACTTTTTGCTGTTGTGGGAACTGGTACCCAATTGCTAATCTTGCTTTGTGTCTTGCTGTTTCTAGCACTTATTGGCACCCTCTATCCCTACAATCGCGGAGGATTGTTAAATTGGCTTGTCTTGCTGTATGCTCTTTCGTCTGTTTTTGCTGGGTACACTGCAGCATCCTTCCATGGCCACTTTGCTGAGAATGGATGGGAAAGGAGTGCTAGTCTAGCAGCAATTCTTTACACTGGACCAGTGTTTGTTGTAGCCTCTATCCTCAACATTGTTGCAATATCTTACAGGGCTACAACTGGACTCCCATTCGGCACCATTATTGTGATTCTTGTTTTATTAACATTTCTCGCCATCCCATTGCTTGCATTTGGTGGAGTGATTGGATACCGTTTTAGATCTAAATTTCAAAGCCCCTCTGCCACGAAGAGACATCCAAGAGATATTCAACAGCTTGCTTGGTACAGGAGAACACCATTTCTAATGTTTATTGGTGGTCTTGTACCTTTTAGTGCAATTGTCCTGCAACTACACCAGGTGTATGCTAGTATGTGGGGCTACAAAATATACACTCTTCCTAGCATTTTGTTTGCCACATTCATTCCTGTCATTGTGATCATTGCACTTGTCAGTATTGGCTTGACATACATTCAACTATCTGCGGAAGACCATGAATGGTGGTGGAGATCAGTGGTGTGTGGTGGCTCAACAGCCATTTTCATGTTTGGGTATTGTATCTACTTCTATGTGAGATCAAATATGAGTGGATTCTTGCAGCTATCCTTCTTTATTGGCTATAATGCATGCCTGTGCTATGCTTTCTTCCTAATATTTGGGGCCGTTAGTTTCCGAGTTTCATTGCTATTTGTTCGCCATATATACCATGATGTTAAAAGAGAGTGA 1773 0.4185 MATKPLHLILLLLLLCYTLEFSSASPSDHLYDVGELVPLFVNKVGPFNNPSETYEYYDLPFCTPDPIVRKKESLGEVLNGDRLSNALYEFKFRVDKIDETLCQKKLTIDQIATFKRAINRDFYFQFYLDDLPFWGFIGKLEEDGWTPGGGGPNYHLFTHVQFDVLYNGNRIIQVNAFGDPNHAVDITKDIGVDVKFTYSVIWNATKVRFENRMDRYSRASLMPVHQQVHWFSFINSIVIILLLIGLLALLYMRHLRSDLKKYSNANEEDNEVGWKSLQHGDVFRPPPNSSLLFAVVGTGTQLLILLCVLLFLALIGTLYPYNRGGLLNWLVLLYALSSVFAGYTAASFHGHFAENGWERSASLAAILYTGPVFVVASILNIVAISYRATTGLPFGTIIVILVLLTFLAIPLLAFGGVIGYRFRSKFQSPSATKRHPRDIQQLAWYRRTPFLMFIGGLVPFSAIVLQLHQVYASMWGYKIYTLPSILFATFIPVIVIIALVSIGLTYIQLSAEDHEWWWRSVVCGGSTAIFMFGYCIYFYVRSNMSGFLQLSFFIGYNACLCYAFFLIFGAVSFRVSLLFVRHIYHDVKRE 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01313 590 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 21 588 IPR004240 GO:0016020
Pumo11g01313 590 Pfam Endomembrane protein 70 53 547 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01313 Pumo-Chr11 42927154 42931255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01313 6 590 Miscellaneous Gene Families AT2G01970 49.663 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01313 K17085 - gmx:100818419 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01313 11 42927154 42931255 Pumo11g01313 11 42927154 42931255 ECH